NONHSAT057123

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT057123

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

1960 nt

Genomic location

chr18+:6896759..6898718

Exon number

1

Exons

6896759..6898718

Genome context

Sequence
000001 TACGAGAATA AAAAGAGAAT GAAGTTAGTA GATATATGAT TGCTAACAAC AAAAGTTGTT TTTCAAAGGA ATTTCTAGAA 000080
000081 ATGGGATTCT TAATAGGTAT TGTCTATCTT CGTAGCTTCA TTTATTCAGT GAGTTTTACC ttttatttta ttttatttta 000160
000161 tttatttttt gagatggagt ttcgctcttt ttgcccaggc tggagtgcaa tcgcgcaatc ttggctcact gcaccctccg 000240
000241 cctcctgggt tcaagtgatt ctcctgcctc agcctcctgg gtagctggga ttacaggcac gcaccacatg cctggctaat 000320
000321 atttttgtac ttttagtaga gacgaggttt caccatgttg gccagcctgg tctgaaactc ctgacctcag gtgatccgcc 000400
000401 caccttggcc tcccaaagtg ctgggattac aggcatgagc cactgagccc agccGAGTTT TACCTTTTAT TCGAATGAAA 000480
000481 ATATAGCAAG TTAGTTTTGT AGATATCTTG ATAGTCCTTC AGGAATAACA TTTTCCTAGG CTTGCATTGA CTTTAACATG 000560
000561 CCTGTATCAG ATAGACATTA TGTAGTTAAG TGGATACCAT AGCTGTTACT TTCCTTTAAA CATACTAATA ATAATTCTTA 000640
000641 GAATCAGAAT GATACTTACA AAAATTATTT TTGCAAATCT GCCATGATCA CCTTAAAGGG GCGCAGATCA TGACAATTTT 000720
000721 TGTCTGGACA TGCTTACTAA AGAATAAACA TTTGTCTTCT TGTTTATAAA GGATGAGAAG CACTCATTTA TCCATTGTAG 000800
000801 AGCATGTATG ATTTGCTGTC TCTAGTGAGA CTGATGGATG GCCTTAAAAT GAAGCATTCC AATCATGTTG AAAAGAAGTA 000880
000881 GCCTtgttga gcaaaaaagc caactgtaaa agttaacata ttgcatgatt ccacttatat aacatttttt aaattaaatt 000960
000961 ttattgatgg agactagatt agttgccaga ggttgggagg gatgatttgg aagggagatg gttttggtca ctaaaggcca 001040
001041 acatgaagga cccttatggt gttggaactt gtggtgctgg gatcttgact gtggtgatgg ataactgacc ctctataaaa 001120
001121 ttctactgaa attaatacac acacacacaa atgagtataa gtaaaacttg gaaatctgaa taagataggt aggttgtatc 001200
001201 aatatcagta tcctgattgt gacattatgc tgtagttctg tgaattgtta ccattgtgga aaatggcaga atacaaagaa 001280
001281 tctctctgta ttatgtctta aaaccacatg tgaatctaca attatctcaa taaaaattta atttaaaaga aAAGTAGCCA 001360
001361 GTAAAAGTCA TCTATGGTGT GAGGTAAGGA CGGTAGTGTT TCTACCATCA GGAGAAAAAc ttgagagatg ggtgcaccaa 001440
001441 aatctcagaa attaccacta aagGGTGTAG TGGAAggtag ggggtggagg aaggcatagt gaccaggaag gcatgctgat 001520
001521 ggcctcaaac gttttttttc tccttttggt attagattat atgatgtgtt cactttgtga aaattcatca agttgtatac 001600
001601 ttctgacttg tacattttat atataatata tACACATATA CACACACACA TTaacccgtt ttccacttgc tccaagaata 001680
001681 ctgcactggc agcgagctgc actttccttc ctaaatggaa aatgggttAA AAAAGAAAGA GAAGAGTCGA CAGAGACCAA 001760
001761 CAGGAGCCCC AAACATGTAT TCCTCTTCAC TATTGGCCTG GACATCTCCA CATAGGCAGT CATATAGAGA CTTGAAATAT 001840
001841 CATTCAAGGG ATTTGGGTAT CCAGTAGACT TTTAGTTACA TATACTACAA AACTGACTTT GTACTCTCAA GTAGACCTTT 001920
001921 CGTAGAAAGA AAATGTTTCT AATAAAAATG TATTAGAACT
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Predicted Small Protein

Name NONHSAT057123_smProtein_35:283
Length 83
Molecular weight 9529.1015
Aromaticity 0.231707317073
Instability index 63.8258536585
Isoelectric point 6.04400634766
Runs 12
Runs residual 0.0104397634885
Runs probability 0.0552832244008
Amino acid sequence MIANNKSCFSKEFLEMGFLIGIVYLRSFIYSVSFTFYFILFYLFFEMEFRSFCPGWSAIA
QSWLTAPSASWVQVILLPQPPG
Secondary structure LLLLLLLLLLHHHHHHLEEEEEEEELEEEEEEEHHHHHHHHHHHHHHHHHHHLLLHHHHH
HHHHLLLLLLEEEEEEEELLLL
PRMN LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLHHHHHHH
HHHHHHHHHHHLLLLLLLLLLL
PiMo ooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiTTTTTTT
TTTTTTTTTTTooooooooooo