NONHSAT056961
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT056961 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1264 nt |
Genomic location |
chr18-:2945625..2946888 |
Exon number |
1 |
Exons |
2945625..2946888 |
Genome context |
|
Sequence |
000001 AAATGCTCTG TATCCAAATG CCAGCTGAGA TCATTAGCCA CGCTGAAATT CGTTGACTCG TACTGTGCTA AGGTTGCTGC 000080
000081 TAGACGTTGT TAACAGAGTT AGTGGTCTTT GGTTATGGTG GTTAGCAGCC CCACTTATCT GTTCCATACT ACCAGTGAAT 000160 000161 AGTTTAAAAT TCATGTTGCA CCTATAATTT ATCCCACATA AATAATTCAG GCTATTTATT TTGGCATTCA ATTGATTTTT 000240 000241 TTCTCACTTT AAAAAACTGA GGTATGGAGA CTGGTGCTAG CAACACGGGA TTGGCTAACG CATCCTCTTG CTGTTCCCGG 000320 000321 TGTTTGGGCC TTGCCTGTGA CAGTGGGAAA AAAAATGGCC TTGCTGTGCT ACAACCGGAG CTGCGGTCAG CGCTTCGATC 000400 000401 CTGAGACCAA TTCCGACGAT GCTTGCACAT ATCACCCAGG CGTTCCAGTC TTTCACGATG CATTAAAGGG TTGGTCTTGC 000480 000481 TGTAAGAGAA GAACAACTGA TTTTTCTGAT TTCTTAAGCA TTGTAGGCTG TACAAAAGGT AGACATAATA GTGAGAAGCC 000560 000561 ACCTGAGCCA GTCAAACCTG AGGTCAAGAC TACTGAGGAG AAGGAACTAT CTGAATTAAA ACCAAAATTT CAGGAACACA 000640 000641 TTCAAGCCCC TAAGACAGTA GACGCGATAA AAAGACCAAG CCCAGATGAA CCAATGACAA ATTTGGAATT AAAAATATCT 000720 000721 GCCTCCCTAA AACAAGCACT TGATAAACTT AAACTGTCAT CAGGGAATGA AGAAAATAAG AAAAGAAGAC AATGATGAAA 000800 000801 TTAAGATTGG GACCTCATGT AAGAATGGAG GGTGTTCAAA GACATATCGG GGTCTAGAGA GTCTAGAAGA AGTCTGTGTA 000880 000881 TATCATTCTG GAGTACCTAT TTTCCATGAG GGGACGAAAT ACTGGAGCTG TTGTAGAAGA AAAACTTCTG ATTTTAATAC 000960 000961 ATTCTTAGAC CAAGAGGGCT GTACAAAAGA GAAACATGTG GACTAAAAAA GATGCTGGGA AAAAAGTTGT TCCATGTAGA 001040 001041 CATGACTGGC ATCAGACTGG AGGTGAAGTT ACCATTTCAG TATAGGCTAA AAATTCACTT CCAGAACTTA GTCGAGTAGA 001120 001121 AGCAAATAGC ACATTGTTAG ATGCGCATAT TGTATTTGAA GGAGAGAAGG AATTTGATCA AAATGTGAAA TTATGGGGTG 001200 001201 TGATTGATGT AAAGCGAAGT TATTAACTAT GACTGCAACA AAGATTGAAA TCACTATGAG AAAA |
Predicted Small Protein
Name | NONHSAT056961_smProtein_263:403 |
Length | 47 |
Molecular weight | 4642.2592 |
Aromaticity | 0.0 |
Instability index | 77.3913043478 |
Isoelectric point | 8.50396728516 |
Runs | 9 |
Runs residual | 0.0342908902692 |
Runs probability | 0.0393040098922 |
Amino acid sequence | METGASNTGLANASSCCSRCLGLACDSGKKNGLAVLQPELRSALRS |
Secondary structure | LLLLLLLLLLLLHHHHHHHHLLLEELLLLLLLLEEELHHHHHHHLL |
PRMN | - |
PiMo | - |