NONHSAT056060

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT056060

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

1464 nt

Genomic location

chr17+:74565874..74567322

Exon number

1

Exons

74565874..74567322

Genome context

Sequence
000001 TTTAGAACCC TTAACCCATA AGGACCACCT GTAAAGCTGC TCTGTGGGGG GTGGGGAAGA TGTCCTCAGC GAGACGCCGA 000080
000081 GATAGGAGGG CTGGTTGTCT GGGCCACAGC AGTGGCGTCG ATTTTTAGGG ACCTGATCTC AGGGACAAGA AATTGTCTCA 000160
000161 GAACCCCCGG GAGGAGGTTC AGATGAGGGT CAGGTCGTGG CTCAAGAGAG CTGGACCCAG GCCTGCTGTG CAGGAAGGTG 000240
000241 GGAAAGAAGA CAAAGGGCCC ATTGTTTCCG CCTCTCAGGA CACTGGGCCT CGAGTCTGCT CTCCCGTTTC ATGGGCATGA 000320
000321 CCCTGGGAAG GATGCCCAGC AGGAGGAGTG GCCCAGACTG GCCCCAACTC TTGTTTCCAG CACAGTGTGC TCAGTGGGAC 000400
000401 AGCGGACCCA GCCCAGTCTG TGACCCGGAG CCGCTGGCGG CTGGGCTGGG CAGGGAGAGT GCAGCCCAAA GCCGAGAAGC 000480
000481 CAGACCTGCT CACCCCATTC AGAAGAGCTG CCTCTCCCAC CCCCAGCCCA CTGCCCCCAG AGGGCTACTG GGAACCCGGA 000560
000561 GGGTCACCTG GGCTTTCCAG GGGTAGACAA AAAGTAGAAT TTCCCAGTGC TGTTATGTGA ATAATTGGGG ATGATTGAAT 000640
000641 TCTTAGGGCT TTTCTTACTG CCCTTCACCC ACCTCCTCTT ACCCCATGAT GGGCCCTGGG AGCAAAAAGG AGATAACCAC 000720
000721 AGTGTCCCTT GCCCCTCTGC CACGCCCCAC ACCACCACGG CCTGGCTGCT CACCTGTCCC CTTTATCTAG GCCCTCAGGG 000800
000801 ACAGGCACGC CCAGAATGGC CGATCTCAGC ATCACATAGT CGCGGATGTC TGAGGGGATG AAGATATACT GCAGGTCCTG 000880
000881 TCAGAATAGA GACAATGAGC CCAGAGGGGA ACCAGGACAT GTTTAGCTCC TCAGTGTGGA CAGCCCTCCA CCCAACCTTG 000960
000961 CCCCCTGAGC CGACTGGAGA ATTTCCCTTA AATACCTTTC GTTCCCACCC AGAGGTGCTG TACTGGTTTC AGTGTAGGTC 001040
001041 CACAAATCCT CTAATGCTCC TTCAGGAGGT GGCACCCAAT TGCCATCCCC TGGAGTATGG GCTGGACTTA GCGACTCATG 001120
001121 CACAGGATTT TTCTGATAAA GAGGAAAGTG ATGGTGTGTG GCTTAGAGAC TAGGTCATAA AAGGCACTGT GGCTTCCTTT 001200
001201 ACGTTCTCAG ATCACTCACT CTGGATGAAG TTAGCTGCCA TGTCGTGAGG ACACTCAAAT AGCCTACAGA GGGCCCAAGT 001280
001281 GGCAAGGGCC CGTGAGACGC CATCTTGATG TCAGCTCCAG TCAAGCTTTT GGGTCTCTCA GATGATGCAG CCCATCATCT 001360
001361 GCACCTGGGC CAAAACCTCC CACTAAGCTC CCCACAAATT CCTGACCCAT TGAAACCACA AGATAGTCAA TATTTGTTGT 001440
001441 TTAAAGCCAA AAAAAAAAAA AAAA
[back to top]

Predicted Small Protein

Name NONHSAT056060_smProtein_182:319
Length 46
Molecular weight 4848.4853
Aromaticity 0.0444444444444
Instability index 48.9688888889
Isoelectric point 10.2743530273
Runs 7
Runs residual 0.00669191919192
Runs probability 0.0277083806495
Amino acid sequence MRVRSWLKRAGPRPAVQEGGKEDKGPIVSASQDTGPRVCSPVSWA
Secondary structure LLLHHHHHHLLLLLLLLLLLLLLLLLEEEELLLLLLEEELLLLLL
PRMN -
PiMo -