NONHSAT055838

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT055838

Source

NONCODE4.0

Same with

,

Classification

overlapping(AS),sense

Length

524 nt

Genomic location

chr17+:73028670..73045379

Exon number

5

Exons

73028670..73028748,73029026..73029194,73030128..73030212,73031327..73031452,73045315..73045379

Genome context

Sequence
000001 AGTGTGGTTT TGCCTTCGAG GAGGGGTGCC CAGTGGTGAT GCCCAGGAGA GGGAATGGAA ACCTGGAGCT GGGAGTGAGG 000080
000081 GGAGGAGACA GGTTTCTGCA GACTCTACAT TTTGGAGAGA AACAGAAAAG AATGTCCCCA AGTCTCCTTT GCCCTGCGAT 000160
000161 GCTGGGGCAG ATTGGCAAGG TCCCAAGAGA AGCACAATGG TAACCGACGC TGCCCTTGGC TGAACTTCTT CTGTTAAATC 000240
000241 CTTCGGATGG ATGCTGGAAT CGACCTTGGT CTCTAGTTCG ACTCCCGTGC AACGTGTTGA GGAGGAGCCA CCTCCTCCAA 000320
000321 GCGCCTAAAG CCGACCCAGA AACGCCTCCC AATCCCTCCA CACCGCGGCT CCCGGGATCC GAAGCTGGGG AGCTGCTTCT 000400
000401 GTCCAATCAG GCTTTGCATC CCGGGACGCT TCCGGTTATG GCGTCATTAT GCAGCCAGGG ATGAGACAGG AGCCTATCTG 000480
000481 ATTGACAGGG ACCCCACCTA CTTTGGTCCT ATCCTCAACT ACCT
[back to top]

Predicted Small Protein

Name NONHSAT055838_smProtein_38:202
Length 55
Molecular weight 6063.0338
Aromaticity 0.0555555555556
Instability index 58.1148148148
Isoelectric point 10.8430786133
Runs 10
Runs residual 0.0224932249322
Runs probability 0.0499028440205
Amino acid sequence MPRRGNGNLELGVRGGDRFLQTLHFGEKQKRMSPSLLCPAMLGQIGKVPREAQW
Secondary structure LLLLLLLLEEEEELLLLHHHEEELLLLEELLLLLLLLLHHHHHHLLLLLLLLLL
PRMN -
PiMo -