NONHSAT055833

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT055833

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2454 nt

Genomic location

chr17+:72978488..72980941

Exon number

1

Exons

72978488..72980941

Genome context

Sequence
000001 CGCGGAGGTA GGGGATGCAG GCTGGGGGTG AGCAGCAGCG ACGGTGCCAT CGGCTGTCGC ATCGGCGTCC TCAGCCCCGC 000080
000081 CCCGCGCCTA AGCGGCGCTC GCTGGGAGGG CCTGGCCATC TTCGCGCGGT GGCCGGGCGC TCCCGGGGTC CCCTGCCTGT 000160
000161 GCCCCGTTCC CCCATCCAGA ACCTGGGCTG GAGGTGCTAG GGAGCTCTGG GAGCCTGGGC TGCACGCAGG GAAGTGCTCT 000240
000241 CGGCCGCCGG GGTCACAAGA CTCCAGGGCT TCACAGTGCC CAAGGCTTGG TGGACATCGA GCCCACCGGG GAATCTTTGC 000320
000321 CATCAGCGCC GTGTTTTGAT GCCCGCGGCA AGGAACACCA CGAAATAGGT TTCCTGACAC TCAGGTGAGG TGCCAGGTCC 000400
000401 TGGGTTACCA AGGTCAGGTC AGGTGGTCTG TACTTGCCAC CCCTGGGTCG GCTCTCTACC CTGCTTGACT ACATCACAGG 000480
000481 AAAAGGCTGG AAATGGATCC GGGGCTTGTT GACCTGTAGC TCATGGAGGC TGAAGAATTT CCTCCTTGAA GGCAGACCTG 000560
000561 ATTTTCCTCC TCACGGAAGA GTTTAGGCCA GTCATAGGGT Gtttttcttc tatttatttt atgttatgtt atgttatgtt 000640
000641 atgttatgtt atgttatgtt atgttatgtt atgttatgct attttatttt attttagaga cagagtctca ctctgttgcc 000720
000721 caggctggag tgcagtgggg ccatctcagc tcactgcaac ctctgcctcc cgggttcaaa tgattctcct gcctcagcct 000800
000801 cctgagtagg tgggattaca ggcgtgcacc accatgtctg tctaattttt gtatttttgg tagagatggg gtttcgccgt 000880
000881 gttggcaagg ctgatctaga actcctgagc tcaagtgatc cgcccgcctc ggcctcccaa agtgctagga ttacaggcgt 000960
000961 gacccactgt gcctggcTTC TTCTTTAGTA AAtaaactat tttatcaaag tataatatat cttcagaata gtgcacacat 001040
001041 cttaagtgta cagttgggtg aattttcaca aagtgaacac acctgtgtaa ccagcaccca gctcaggaga tagaaTTCTC 001120
001121 CTgaatggga gttagtgttt aatggtacag agtttcagtt ttacaagatg aaaatagcta cggagatgga tggtggtgat 001200
001201 agttgtacgt tataaatgta ttgaatacca ctaaactgta cactcaaaaa tggtaaatgg taaatcttat gtgtgtttca 001280
001281 ccacaatcgt aaaaaaaAAA AAAGAAAAAA GATCAgctgg gtgtggtggc acaagcctgc agtcccagcc atttaggagg 001360
001361 ctaaagcagg aggatcactt gagcccagga ctttgaggtt acagtgaact atgattatga cactacaccc cagcctggga 001440
001441 tcccatctca aaaataagtt taaaaaaTTT TAGAAAAAGA TTCCCAGCCA CTTAGAATTC TCCACATGCC TTCCCAAAGC 001520
001521 CAAACACTAT CTTGATTCAT TTTGCCAGTT TTTAACttta ttattattta tattttatag agacagaggg tggctgtgat 001600
001601 gcccaggctc gtctcaaact catggcctct agtgatcctc ttgcctcacc cttccgagta gctgggattc cagacACATG 001680
001681 AACtttattt ttatttttat tttttgagac agagtctcgc tctgtcaccc agactggagt gcagtggcgc aatctcggct 001760
001761 cactgcaagc tccacctacc cagttcacgc cattcgcctg cctcagcctc ctgagtagct gggactacag gtgcctgcca 001840
001841 ccacgcccag ctaatttatt ttttattttt ttagtagagt cggggtttca ccgtgttagc cagaatggtc tcgatctcct 001920
001921 gacctcgtga tctgcctgcc tcggcctccc aaagtgctgg gattacaggc gtgagccact gcacctggcc Atgaacttta 002000
002001 tataaaatgg aatcatgcag tgctgtgata gaatcataac cactaaagat atccacatcc taacccccag aatctctgaa 002080
002081 tatgttacct tgcccaacat aagggacttt gcagatgtga tttagttaaa gacattgaga cagggagatt atgctgtatt 002160
002161 attcagtgtg cccagtttaa gcagaagagt cctttataag agggaggtgg aaaaggtaag agtgatggga tgtgaaaaag 002240
002241 actccacctt ctgttgctga ctttgaagat tgacaaagag gccatgagcc aaggactatg gggtggcctc tagaaggtgc 002320
002321 aaaagacaag gaaacagata ctcccctgga acctccagaa ggaacacagc ttctaccaat gctttgactt tagccagtga 002400
002401 tccttgtcag acttctacag aattataaaa taataaattt gtgttgtttc aagc
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Predicted Small Protein

Name NONHSAT055833_smProtein_620:808
Length 63
Molecular weight 7047.5264
Aromaticity 0.129032258065
Instability index 52.1888709677
Isoelectric point 7.54913330078
Runs 11
Runs residual 0.0237788018433
Runs probability 0.025509466686
Amino acid sequence MLCYVMLCYVMLCYVMLCYAILFYFRDRVSLCCPGWSAVGPSQLTATSASRVQMILLPQP
PE
Secondary structure LEEEEHHHHHHHHHHHHHHHHHHHHLLLEEELLLLLLLLLLLLLEELHHHHHEEEELLLL
LL
PRMN LLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LL
PiMo i???????????????????????????????????????????????????????????
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