NONHSAT055648

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT055648

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3032 nt

Genomic location

chr17-:70067183..70112157

Exon number

7

Exons

70067183..70067372,70070690..70072874,70078062..70078182,70080047..70080169,70081131..70081186,70110347..70110541,70111995..70112157

Genome context

Sequence
000001 CTGGCCTGAG CTCCGGACTC CGGGGACAGC GCGTCCTGTC CCGAGGGCCT CCCGCCCCCC GGGAAGGCCA AGGTCATGAG 000080
000081 GTCAAACCCC AACTTTTGGG CTTCCGCGAG AGTAAAGCCC CCGGATGGTC CTCGGAGCTG TGACGTCACA AAAAGTGCTT 000160
000161 GGGGTCTGGT TTCCCGCAGA ATCCAGCCTC TGTCCACGTG AACTCTGCTC TGTCCTCTGG GCTCATAATG TTCTGAGACT 000240
000241 CTTGCTGCCT CTTTCATGGA TTCCCCTTCT ATTTCCCTGA GACGACTCAC AGGTCACAGA AAGCTGCCTC CCATCCTTGC 000320
000321 GGCTCCATCA AGGTGCTTTG GAGGCAGGTA AAGCGCAGCC AAAAACAATC CATTGATACA CTTGGTGACA TTAATTGAGA 000400
000401 AAAAAACAAT ATGGTCTGGC CATGGAGGCA TGGTATCCGT AACATCCCCC AAAGGAGCTA AAGAAGAAAT CCACAATTTA 000480
000481 CCATGAGCAT TTCTCGTCTG AAGATTGCCA AGCGATTCCT CCAGGACATT CCTCAAGATC AATTTCTGTT CATCCACCTT 000560
000561 GTCCTGGGAG GGACATCAAT GGGTTTCCAT GTCCTTTGGC TTCTGGTTGA GTTCACTCAG TGGAGAACCC TGGCAAGAGG 000640
000641 CAGGAAAAGG GGAGGAAGCA GCCTGACCGG TTTGAATTTC ACCTTCTGTT CACCTTGGAT GAGAGCAGTA ATCATCACGA 000720
000721 TCCCAGGGAA CAGCCAAAGG AAGAGAAAAG GCAAAAGATT TGGACAAGAC TCATGAAGAC TAACAGCTCT TGGATAATTG 000800
000801 AGAGAAGGCA GCTGCGTGAA CAGTTTTGAT GCAATCATGA AGGCAGGGCC CAGTGCCTGT GGCATCTGCC TTTTTCTGGA 000880
000881 ACCAATCCAT ATTTCCTTGT GGTTTTCTAA GGTGCAGAGA GGGCACATTG GGAACTTTGC TTGGGGTCTT TTTCACATCT 000960
000961 TAGAGGGAAG GTCCCTCAAC ATCTGCATTG GCGGAGTGTG ATCCTCATGT CCCTCTGAAT GATCTGGACT TGAGGTAACC 001040
001041 AGCCCCTTCC AGGAAGCTGT CCCATGAGTG AAGCCTCAGC AGCAGCCTCT GTCAGTCCCT CCCCCACAGA ACCTTTGGCT 001120
001121 TCCATTTGAC CAGCCTTGAC ATCCAGTGTC CAAACACCGA TAAAATTGAT TCCACTAAGC GTGGGAAAGT CCTGGAGCAT 001200
001201 CGATTGTTTC CTCCTCTGCA CCCCCGATAC CCTGGCATTA GCACTCTCCC AGAATGTACC TTGCTTGTTT GATTGGAGGA 001280
001281 GGTCAAAGCC CTGATGAAGA ATGAGTGGAA TTCCACAGGA TTGGAGCAGT CTTGATAAAT GACAGCAGGG GATGGTGTGG 001360
001361 GGAGGGGAAA GGATCAGAGG AAGTGTGGAT AAATGAATGG CTTAAAAAAT AATCCACCTT TGCCTCCCCC TTTTCTACCA 001440
001441 GTCTGTCTAG TGCTTCAGGG TGAAAAAAAA AAAAAAAAGC TTGCCTTTCT AAACATTTGG AGTTTCAGAA ATGATCTATA 001520
001521 GAGCATGTTT AGTTTTTCAA GTTAAAAATA TTAAAAGAAA AAAAATGTTT GAGGGCTTTA CTGCTTTCCC GCAAAGAGCT 001600
001601 AGAGCCACCC AAGCAGGATT GACTGTCATT GGTTTGAGGT TTCTGTTTGC TTTGAGGCTA TTTTTTCCTT AGTGCTATAA 001680
001681 ACTAGATCAG TCCATTTTTA GCTGATAACC CTTTCCAATT TCGCTGTGAA ATGAGGGGCT GGTTGGGTGG TTTTTTTTTA 001760
001761 TGTTCTTTCC AGCGTTGACT TTTATGGTCT TTGATTCCAA GGTACCTCGT CGACTCTGAA GACGAGAGAT GGGTAGGTTC 001840
001841 TAACTCCAGA TGAGCCACTG CAAGATGGTA CCAGGATGAG ATAGAGAGTC TCTGTACTAT CTTTTATATG TTCTCAAACC 001920
001921 CAGCCAGGGA TCAGAGTGAC AATATAACAT GGGGAATCAT AGAGATGTTT ATGGTAATTC TGCTATGAGT CAACTGAGAT 002000
002001 GTCCCTTATG GAGATAACTT CCCATACTAT AGGCAGTTGG ACAAAGATGT AAATGCCTTG TTTACAAATG CTACCCAGAT 002080
002081 CTCCTAATTA GGACCACACA TGCGGAGAAC CCAACAGCTT TTGGACTTAT CGGCCAATGG TCTTCTTGGG AAGGTCTCTC 002160
002161 CTAGTCATGG GAATTGTCTT TTTATTGTTC AAGCTTTTGC ATAGACCTGG AAGAGGCATC CATTGCTGTT ACCCCTGAGT 002240
002241 TTATAATCAT GCTGCAAGTC CAGTGGGGAA CTTTGGCACA AAGCATTGAA TGAGATGGGA CTGCACTTAT GTAGCCTGCA 002320
002321 TTTCTTGAGA ATAAAGATTT CTGTTCATTT AGTGCAGTGG TTATCATCTG GGGGAAAACC AGTGAGTAGA GGCCAGGGAT 002400
002401 GCCACTAAAA TCCCTACACT GTGCAGGAAA GCTGTCAGCC CTTTGTCCCA CAAGAGATTA ACTGGTTCCA AAAGTCAGTA 002480
002481 GTGCTGTGGT TGAGAAACCC TGTTTACCAC CTGTAGGTTC CAGAGAGCTC GGATGGTGGT GGTCATTGTG CTAAGTTTCA 002560
002561 AATTCAGTAT TTAGGTTTGG TTTTTAGCTT ATAGGCAACA AATTGGCTGA CTATGGGGTG AAAAGGAAGC ACCTCCTTTA 002640
002641 TCAAGATTGG CTTCAAAAGA TGTCTGCCTC CCCTTCTGGT GGGTCCTGTG TCCATTCACA GTGTGAGAAA TGGAAAGGAG 002720
002721 GTCACTAAGA GACTTGCAAT GGATGTAATA ACTGGATGCA GAAACTCTGG ATCTGAAGGG AATGTTCATG ACTATTTCAT 002800
002801 CCCTCCTGCT GCCTTGGAGA ACCAAACGCA GGAGCCACCC AAGGTGAAAA CCATCCATTT CTTGGAGAAG TGCCACGGTG 002880
002881 GGGTTGCAAG TCCCAGGATC AAGTTTTCGA TGTGTCTCTT TTTCCCGTAA AGTGGCTGAA ATCTGAAGCT GAATCTGCAA 002960
002961 GTGTCATGGA GTCATTGAAT CTCACAGTCT CAACTGATAA AAGTTATTAA AGGTCGTCTG GTTCAGCCTT CT
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Predicted Small Protein

Name NONHSAT055648_smProtein_482:775
Length 98
Molecular weight 11138.9872
Aromaticity 0.113402061856
Instability index 50.2391752577
Isoelectric point 11.8396606445
Runs 11
Runs residual 0.0181366933944
Runs probability 0.0363411539882
Amino acid sequence MSISRLKIAKRFLQDIPQDQFLFIHLVLGGTSMGFHVLWLLVEFTQWRTLARGRKRGGSS
LTGLNFTFCSPWMRAVIITIPGNSQRKRKGKRFGQDS
Secondary structure LLLHHHHHHHHHHHHLLLLLEEEEEEEELLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLL
LLLLLEEEELLLEEEEEEEELLLLLLLLLLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL
LLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL
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