NONHSAT055333
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT055333 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
599 nt |
Genomic location |
chr17+:62926267..62930321 |
Exon number |
4 |
Exons |
62926267..62926468,62926836..62926986,62927321..62927405,62930161..62930321 |
Genome context |
|
Sequence |
000001 ttacccccaa ccccgtgctc tctgagacat gtgctgtgtc aactcagggt taaatgaatt aagggctgtg caagatgtgc 000080
000081 tttgttaaac agatgcttga aggcagcatg ctccttaaga gtcatcacca ctccctaatc tcaagtgccc agggacacaa 000160 000161 ccactgtgga aggccgcagg gacctctgcc taggaaagcc agagaccttt gttcacgtgt ttatctgctg accttctctc 000240 000241 cactattatc ccatgaccct gccacatccc cctctccgag aaacacccaa gaatgatcaa taaatacaaa gggaactcag 000320 000321 aggccggcag catcctccat atgctgaatg cagGCCCATA AGATGTCCCG GCCTTTCCTT GAACCAGTAG ACCCTAATGA 000400 000401 TGCACCAGAT TATTATGGTG TTATTAAGGA ACCTATGGAT TGACCTTTGT AAAGAAGAAA AACATGTTAG AAGAAAAATG 000480 000481 GAAAAGAACT CTGCATGCCc tcagctcaga tgccatctcc tctgggagct cctctggccc ctgccaaggc tggatcagat 000560 000561 gccctcAGGG CACACACGAT GCTGATCCAG GGCCATCTG |
Predicted Small Protein
Name | NONHSAT055333_smProtein_74:295 |
Length | 74 |
Molecular weight | 8134.2844 |
Aromaticity | 0.041095890411 |
Instability index | 52.0383561644 |
Isoelectric point | 9.41534423828 |
Runs | 11 |
Runs residual | 0.00653999116217 |
Runs probability | 0.0280146456617 |
Amino acid sequence | MCFVKQMLEGSMLLKSHHHSLISSAQGHNHCGRPQGPLPRKARDLCSRVYLLTFSPLLSH DPATSPSPRNTQE |
Secondary structure | LLHHHHHHHHLLHHHHHLLLEEELLLLLLLLLLLLLLLLHHHHHHLLLEEEEEELLLLLL LLLLLLLLLLLLL |
PRMN | - |
PiMo | - |