NONHSAT055108
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT055108 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
586 nt |
Genomic location |
chr17+:59064218..59093146 |
Exon number |
3 |
Exons |
59064218..59064503,59067332..59067596,59093112..59093146 |
Genome context |
|
Sequence |
000001 ttgctttggc tgtctgtgct tgtagggtaa tactcaagaa atctttgccc agtttcaatg ttcaggagtt tcccaaaatg 000080
000081 ttttcttgca gtagtttcat agttggagat cttagattta agtttttaat ccattttgat tttatttatg tgtatggcga 000160 000161 gagatagggg tctattttta ttcttctgca tatgtatatc cagttttccc agcactaatt attgaagaga ctatgtttcc 000240 000241 ccaatatatg ttattgacgt ctttgttgaa aatgagttca ctgtagGTAC AGGACATCTG CTTCAGCCAT GACTGTCGCT 000320 000321 GGGTTGTGGT CAGTACTCTC CGGGGTACTT CCCACGTTTT CCCCATCAAC CCTTATGGTG GCCAGCCTTG TGTTCGTACA 000400 000401 CATATGTCAC CACGAGTAGT GAATCGCATG AGCCGTTTCC AGAAAAGTGC TGGACTGGAA GAGATTGAAC AAGAACTGAC 000480 000481 GTCTAAGCAA GGAGGTCGCT GTAGCCCTGT TCCAGGTCTA TCAAGCAGCC CTTCTGGGTC ACCCTTGCAT GGGAAACTGA 000560 000561 ACAGCCAAGA CTCCTATAAC AATTTT |
Predicted Small Protein
Name | NONHSAT055108_smProtein_308:418 |
Length | 37 |
Molecular weight | 3867.5582 |
Aromaticity | 0.0833333333333 |
Instability index | 63.0944444444 |
Isoelectric point | 6.22064208984 |
Runs | 6 |
Runs residual | 0.0137917637918 |
Runs probability | 0.0594565153389 |
Amino acid sequence | MTVAGLWSVLSGVLPTFSPSTLMVASLVFVHICHHE |
Secondary structure | LLLHHHHHHHLLLLLLLLLLHHHEEEEEEEEEEELL |
PRMN | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | ooooooooooooTTTTTTTTTTTTTTTTTTiiiiii |