NONHSAT055108

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT055108

Source

NONCODE4.0

Same with

,

Classification

sense

Length

586 nt

Genomic location

chr17+:59064218..59093146

Exon number

3

Exons

59064218..59064503,59067332..59067596,59093112..59093146

Genome context

Sequence
000001 ttgctttggc tgtctgtgct tgtagggtaa tactcaagaa atctttgccc agtttcaatg ttcaggagtt tcccaaaatg 000080
000081 ttttcttgca gtagtttcat agttggagat cttagattta agtttttaat ccattttgat tttatttatg tgtatggcga 000160
000161 gagatagggg tctattttta ttcttctgca tatgtatatc cagttttccc agcactaatt attgaagaga ctatgtttcc 000240
000241 ccaatatatg ttattgacgt ctttgttgaa aatgagttca ctgtagGTAC AGGACATCTG CTTCAGCCAT GACTGTCGCT 000320
000321 GGGTTGTGGT CAGTACTCTC CGGGGTACTT CCCACGTTTT CCCCATCAAC CCTTATGGTG GCCAGCCTTG TGTTCGTACA 000400
000401 CATATGTCAC CACGAGTAGT GAATCGCATG AGCCGTTTCC AGAAAAGTGC TGGACTGGAA GAGATTGAAC AAGAACTGAC 000480
000481 GTCTAAGCAA GGAGGTCGCT GTAGCCCTGT TCCAGGTCTA TCAAGCAGCC CTTCTGGGTC ACCCTTGCAT GGGAAACTGA 000560
000561 ACAGCCAAGA CTCCTATAAC AATTTT
[back to top]

Predicted Small Protein

Name NONHSAT055108_smProtein_308:418
Length 37
Molecular weight 3867.5582
Aromaticity 0.0833333333333
Instability index 63.0944444444
Isoelectric point 6.22064208984
Runs 6
Runs residual 0.0137917637918
Runs probability 0.0594565153389
Amino acid sequence MTVAGLWSVLSGVLPTFSPSTLMVASLVFVHICHHE
Secondary structure LLLHHHHHHHLLLLLLLLLLHHHEEEEEEEEEEELL
PRMN LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLL
PiMo ooooooooooooTTTTTTTTTTTTTTTTTTiiiiii