NONHSAT054956
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT054956 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
539 nt |
Genomic location |
chr17-:56423273..56424972 |
Exon number |
3 |
Exons |
56423273..56423674,56424549..56424602,56424890..56424972 |
Genome context |
|
Sequence |
000001 GACTCTCCAT TTCTTTTCCC TCCCTAGAAT CATTGCGATG ATGAGTCCAG AGGACAGCTG GGTCTCCAAG TGGCAGCGAG 000080
000081 TCAGTAACTT TAAGCCAGGT GTATATGCGG TGTCAGTCAC TGGTCGCCTG CCCCAAGGAA TCGTGCGGGA GCTGAAAAGT 000160 000161 CGAGGAGTGG CCTACAAATC CAGAGACACA GCTATAAAGA CCTAGCAAGA TGCAAGGCTG CCAGCATCTT TGCTCTCCAC 000240 000241 CTCCTGCCTC TGCTTATTTC TTGTTCTGGA ACTAAATGAA CAGAACTTCA AATACTTCCT ACCCTCCAAT TCAGACTCAG 000320 000321 CTGACTGTTG AGAGAGCAGC ACATCATTTT ATCATTTTAT CTTCTTTGGA CTACAGGTGG GGTGGGAGGG ATTTGGGTTG 000400 000401 GTGGATTAAC AGATGGAATT GAGGAGAGAG TAGGATGCTG ATTTTCCTAC CCGTGGCCCA GGTCTGTGCC TTCCCCATGC 000480 000481 CAAGGACTCT AGGTCAAATG TCAATAAATA TGAACCTCGA GAAAGTTCTG AAGGCCATG |
Predicted Small Protein
Name | NONHSAT054956_smProtein_275:421 |
Length | 49 |
Molecular weight | 5759.3925 |
Aromaticity | 0.145833333333 |
Instability index | 43.0270833333 |
Isoelectric point | 9.96173095703 |
Runs | 7 |
Runs residual | 0.0197368421053 |
Runs probability | 0.0457263986675 |
Amino acid sequence | MNRTSNTSYPPIQTQLTVERAAHHFIILSSLDYRWGGRDLGWWINRWN |
Secondary structure | LLLLLLLLLLLLLLHHHHHHHHHLEEEEEEEELLLLLLLLLLEEELLL |
PRMN | - |
PiMo | - |