NONHSAT054695

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT054695

Source

NONCODE4.0

Same with

,

Classification

sense

Length

559 nt

Genomic location

chr17+:48624541..48625533

Exon number

2

Exons

48624541..48624646,48625081..48625533

Genome context

Sequence
000001 AGCGGCCGGG CCCACGGCCC CGAGCAGCCA TGCTGGGCGC GCGGGCCTGG TTGGGCCGCG TCCTTCTGCT GCCCCGCGCC 000080
000081 GGTGCAGGCC TCGCCGCGAG CCGCAGgtgt cctggagtct ggcccaggac ctggccccac aggagtccca gcaggtgggc 000160
000161 gctgagtgag ggagtCCCCA TGTCTGGTTT CCTCTGTTTG TCCCTCACCT GGTCGAGTCC CAGACCCTAC TGATCTTGGC 000240
000241 CTGTCCAGCC ACCAACAGTA GGCTGCCTTC CAGTGGGGCC ACACCCAGGC CTGCCAGAGA GATGCCTCCA AGCAGCTGCT 000320
000321 CCAGGAAGGG CCGGGGGAGG GGCCTGGGGA GGGGTAAGAA TGGAGCCCCA AGAACCATTC TGCCCATTGT GACCCGCCCT 000400
000401 GACCTCACAG CCATCCTTCC CACCGCCAGG CCCAGGAGGT TGGGGGAGAC TAACCTGGCA AGGAGCCCCC AATGAGCCAC 000480
000481 CTCTCCTCAC CCCCCAAAAA ACATAAGGGG GAGCACAAAG GCCACAGTCT CCCCCATGGT TCAGAAAGGT GGGTTGGGC
[back to top]

Predicted Small Protein

Name NONHSAT054695_smProtein_29:232
Length 68
Molecular weight 7401.6354
Aromaticity 0.10447761194
Instability index 70.0044776119
Isoelectric point 11.9059448242
Runs 10
Runs residual 0.0059388919278
Runs probability 0.0444091149974
Amino acid sequence MLGARAWLGRVLLLPRAGAGLAASRRCPGVWPRTWPHRSPSRWALSEGVPMSGFLCLSLT
WSSPRPY
Secondary structure LLLHHHHHHHEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHLLLLLLLLEEEEELE
ELLLLLL
PRMN -
PiMo -