NONHSAT054695
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT054695 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
559 nt |
Genomic location |
chr17+:48624541..48625533 |
Exon number |
2 |
Exons |
48624541..48624646,48625081..48625533 |
Genome context |
|
Sequence |
000001 AGCGGCCGGG CCCACGGCCC CGAGCAGCCA TGCTGGGCGC GCGGGCCTGG TTGGGCCGCG TCCTTCTGCT GCCCCGCGCC 000080
000081 GGTGCAGGCC TCGCCGCGAG CCGCAGgtgt cctggagtct ggcccaggac ctggccccac aggagtccca gcaggtgggc 000160 000161 gctgagtgag ggagtCCCCA TGTCTGGTTT CCTCTGTTTG TCCCTCACCT GGTCGAGTCC CAGACCCTAC TGATCTTGGC 000240 000241 CTGTCCAGCC ACCAACAGTA GGCTGCCTTC CAGTGGGGCC ACACCCAGGC CTGCCAGAGA GATGCCTCCA AGCAGCTGCT 000320 000321 CCAGGAAGGG CCGGGGGAGG GGCCTGGGGA GGGGTAAGAA TGGAGCCCCA AGAACCATTC TGCCCATTGT GACCCGCCCT 000400 000401 GACCTCACAG CCATCCTTCC CACCGCCAGG CCCAGGAGGT TGGGGGAGAC TAACCTGGCA AGGAGCCCCC AATGAGCCAC 000480 000481 CTCTCCTCAC CCCCCAAAAA ACATAAGGGG GAGCACAAAG GCCACAGTCT CCCCCATGGT TCAGAAAGGT GGGTTGGGC |
Predicted Small Protein
Name | NONHSAT054695_smProtein_29:232 |
Length | 68 |
Molecular weight | 7401.6354 |
Aromaticity | 0.10447761194 |
Instability index | 70.0044776119 |
Isoelectric point | 11.9059448242 |
Runs | 10 |
Runs residual | 0.0059388919278 |
Runs probability | 0.0444091149974 |
Amino acid sequence | MLGARAWLGRVLLLPRAGAGLAASRRCPGVWPRTWPHRSPSRWALSEGVPMSGFLCLSLT WSSPRPY |
Secondary structure | LLLHHHHHHHEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHLLLLLLLLEEEEELE ELLLLLL |
PRMN | - |
PiMo | - |