NONHSAT054344
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT054344 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1096 nt |
Genomic location |
chr17-:45975752..46018770 |
Exon number |
3 |
Exons |
45975752..45976669,45995818..45995937,46018713..46018770 |
Genome context |
|
Sequence |
000001 GGGGGCGGGA GCAGAGAGAC AAGGAAATGC TGTCACCGCG GTTAACACGC ACGTGGAGgg aagacctggg ttttagtcct 000080
000081 gtctccatca acctcaagaa atgggacctc atggaagGGA GGGGAGGCAA TGCCGAGGAT GTGCTCCTGA GCAGGTGCCA 000160 000161 CAATTCTTCA CCTGTAAGAT TGCTGACAGA AAAGTGAGAC CTCCTCCACC CCAAGGTCTC CTAAGAGAAT GCTGCTAGCC 000240 000241 AAAAAAAGAT CTGCTGATAA TTGAGGAAGA GCATCTTTAA AAAGACACTC AACTACATTT CAGAAACATA AAGATCTAAG 000320 000321 TGTTGGCTCT ACAAGGGAAG AAATAAAGAG AAAGAACTTT TTTTCCTCCT ACAACAGGTC TAGACAACGT CATACAAGGA 000400 000401 GTTGCACGCA TATCCAAAAC AAAAGCAAGG CAAAAACAAG CAAAAAAGCA ACAAATGCAT TCCAAAATGA TGTCCATTTA 000480 000481 TCAGCCCAGA AATGTACTGG ATACTGGTTT AGTTCAGCCT GTAGGTGCTG GGAAGAAATT CCGACAAATC CAAGTCAGTT 000560 000561 GCAAAAAGGG AAAACTCCAG ACATATCACC CAATGAACTT GTAAGAAAGC ATATGAGCTT CCCTGAACAG ATTTTACTCC 000640 000641 AGGTTTGCAG CCCGCAAGAT TTAAGATGGG GCCATGAGGT TAAATCTTGT AAACTCAGAA GTGTTCACGC TACTGCATCC 000720 000721 CTAAACTCTG TAACTCTCTA CATACTCTTT AAAGCAGTGT TTCTCTGCAT CTTTCATTCC ATAGCCATTG TCCACCTGAT 000800 000801 CCAAAATATC CTAAGTTTTT CAGTGTTTGG AAGCAGGGTT TCCAATTTTT GTGTATACAG AAAAGGGGGG TGTGTGTGAA 000880 000881 AAAATAAGTA TTAGAAAAAA AACATGTTAT ACATATCTAT CACAGAAATG AGTGGGCAAG GTTTAGAAGA TGGCTGAAAC 000960 000961 CAAGCCAATA CTAAGGTCTA CTGGTTGGCT GCAACAAGTT TAAAATGTCT TCATAAGGGC CCTGGTTGGG CAATACTATA 001040 001041 CTTGCTGACA GTACTTGGGA TCTGCCACAG ACCTATAGCA AAGGACTGTT CAACTT |
Predicted Small Protein
Name | NONHSAT054344_smProtein_26:196 |
Length | 57 |
Molecular weight | 6411.3134 |
Aromaticity | 0.0535714285714 |
Instability index | 61.1107142857 |
Isoelectric point | 9.18121337891 |
Runs | 11 |
Runs residual | 0.0431303669009 |
Runs probability | 0.0391434214964 |
Amino acid sequence | MLSPRLTRTWREDLGFSPVSINLKKWDLMEGRGGNAEDVLLSRCHNSSPVRLLTEK |
Secondary structure | LLLLLLLLHHHHHLLLLLLEEEELLLLLLLLLLLLHHHHLHHHLLLLLLEEEEEEL |
PRMN | - |
PiMo | - |