NONHSAT054260

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT054260

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1090 nt

Genomic location

chr17-:45130882..45144877

Exon number

3

Exons

45130882..45131579,45133826..45134119,45144780..45144877

Genome context

Sequence
000001 ggggaggggg ccaggcagcc gttagacagc acaaccgaac ccaacaccgg ggcccaacgg caggggcttg ggcaggagca 000080
000081 aggtccgagg gctgccaggt ccacgctgct tttatgagct gtaacactca ccgcgaagat ctgcagcttc actcctgagc 000160
000161 ccagcgagac cacgagccca ccgggaggaa caaacaactc cagacgcgct gccttaagag ctgtaacact tgccgtgaag 000240
000241 gtctgcagct tcactcctga gccagcgaga ccacgaaccc accagaagga agaaactccg aacacatctc aacatcagaa 000320
000321 cggacagact ccagacgcac caccttaaga gctgtaacac tcaccgcgag gttccgcggc ttcattcttg aaCAATGAAT 000400
000401 CCTCCAATGT ACCTGACTCT CCCTTTGCGA AGAGCATCTC CGTGGCAGAA ATCTGAAAAT GCCCCTGGGG AGACACATGC 000480
000481 ACAAGACAGT GAGTGATGCA GCCGTTTCCC ACGTATCTCA CAATGTACTT CTCTGGTCTT ATTAGAACTA AATGAGTATC 000560
000561 TCAGTCCATA ATCACAGGGA GAAGAACCAC CACAGACCAC ATACCTGGGG TCTTGAAAAT AATTCCATGC ATGTGGGACT 000640
000641 TTCAGAAGCT CTCCATGTCT GTCCAGAAGG GCCCCACAAT ATACTGGGGG GACTTTGTAT GTggctcagc atggagcagg 000720
000721 ggcaggatgt tcattcccac tcatcccctt ggccaagtgc ccttgtgcag tgaacaaact gcacaaccat gctgggcagA 000800
000801 AGCATTTTAT ATCAGTCCCC TTCGGACTTA GTCTCACAGG CATCATTTGA TGGGGGGTGG GAGATGAAGT GGTTCTTCCT 000880
000881 TTTCTAGATA CTTTATTCTA TAAGTTGGAT CACCTCAAGC AAATGCCTGA GTGCAGCTAG CCAAGTTCTC TATCTCACAG 000960
000961 TCTTCATACA GCTGGCTGTC GCTGATGAGT GAGTGAGCTG CGAAATCAGC TTAAACCACA ACATGTTATT TTTGAATTTG 001040
001041 AATAAAATAG GAAAAGGCAG AGTGCATtgt gtgaccatgg ggtaagacac
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Predicted Small Protein

Name NONHSAT054260_smProtein_551:772
Length 74
Molecular weight 8204.1221
Aromaticity 0.041095890411
Instability index 67.5191780822
Isoelectric point 6.32611083984
Runs 11
Runs residual 0.00653999116217
Runs probability 0.0446516034751
Amino acid sequence MSISVHNHREKNHHRPHTWGLENNSMHVGLSEALHVCPEGPHNILGGLCMWLSMEQGQDV
HSHSSPWPSALVQ
Secondary structure LLEEEELLLLLLLLLLLLLLLLLLLEEELLLLLEEELLLLLLLHHHHHHHHLLLLLLLLE
ELLLLLLLLLLLL
PRMN -
PiMo -