NONHSAT054174

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT054174

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

2022 nt

Genomic location

chr17+:43726626..43729225

Exon number

2

Exons

43726626..43728206,43728785..43729225

Genome context

Sequence
000001 CTAAAAGAAA GAAGACCCCA AGACCCCTGT ATGAAGCTTA GAAGGCAAAG GCCTGTCTTC ACAGAGCCAG CTaaagagct 000080
000081 aggctttggc gccaccacat cctgtttgga atccaagctc caccgtttag catttgtgtg accaggggct tgttaaggaa 000160
000161 ggccccaagg ctcccttccc tgcgtataaa aagaagagat ggtacctgct ttataggatg cagtggtgag ggttcaatga 000240
000241 gaagaggctt gcaataggct tggtatagtg cctggcacat ggggatattc aaatagtgct gactattaGA TCAGGAGCAG 000320
000321 ACATTGGGGT AGGAGGTATC AGCCCGGGGA GGAGACGACA AGGAGAGTTA GGGAGGGAAG GACGTGCCAG GGAAGAGACG 000400
000401 GTGGGCTCTG CAGAGGAAGG CTTCTTGGTA CCTCTCGAAA GCTGCTGTGG GAACACACCT TTACTCTGCT GACATTTTCA 000480
000481 GACAGCCGTG CTGGCAGGGA TCTGGGCACC TGGCAAAGCG AGCTGACCAT CTGGCCGGCT GTTTCTGCAA CAAAAAGAGA 000560
000561 TGGTGTCAAA GGTTTTGGGA GCTGGGCTCC TTTGACCCAC AGTTGGCACC GGAGGCCAAA TAAGTCCTCC TGGAGACCAT 000640
000641 CACCTTCTCA TCAGCAATCT TCCAGCCAGC ACACTGCAGC GGCCAGGGAG TGCAGGATTG TCTCCAGGAA GCCAGTGCCA 000720
000721 AGGCCAGAGG CCCAGAGCCT GCACTGAGCA AATCGCCAGG GAGTAGTGAC AGCCCTTCCT TCCTGGTCAG TGCTCTTGTC 000800
000801 CCATGGGGCT ACTATCTCCT CTGGATCCTA TGAAGACTGC TCCCTGCCAC GGCCATGATT ACGTGTCACA CTGCAtggtt 000880
000881 agaagggcag gttctgaggc caggctgcct gggttcatgc attagctgtg tggccttggg caagttactt agccacattt 000960
000961 tgcctcagtt ttctggacta caaaatggag ttgtgagagt tcaccaagtt catgcttata aggagatggc agcagtgcct 001040
001041 ggcatttaaa aagtgcccca caggtgttAT CTGGGGCTGT TGTCATCTCT GTGGCCAATT GTGCATCGGT TCCAGGTCTT 001120
001121 GGGGTCATGT CTGTGTGCTT GGTGCCCTAG GTGCCCCAAT ATCTAGTCTC TTTTTCTCCC ATTAAAAAAT CAATCTCACT 001200
001201 TCTCTGTCTC CCTATCTTTC TCCCTTTCAT CTTCCCTTTC TTAGCACAtt atttattcaa caaacacgga tgaagtgcct 001280
001281 gccctgtgcc aggcgctggg gagggggagg atggggggct acagagatgg aataaacagt gagccctgca caggaccctc 001360
001361 cgagtgccca cagctagGCA GAACAGCAGT TAGTCCATGC TGATGCAGGA TTCATCATCG TCACGGGGGA GCCAGAATCT 001440
001441 GGAGACACCC AGGCCCTGAA GACGGAGCCT GCCCAGCCCC CACCGAAAAG AGAGCTGCTA TTGGCCTCAG CGTCCAGGAA 001520
001521 GAGCCGGGTG ATTCAGCGGG ATGGAGATCC TCCTTCCCAA GACAAGATGG GGGCAGCAGA Ggaccgagca catagtggca 001600
001601 ctccgcaaat gcgtgctgag gaatggatTG TCATTACTGA TGTCATCATC CACCCCTGCA CAAGTCTTGA CACGGAGCAG 001680
001681 CCTCCCACCC CTGCTGGAAG CCTGGCTTAA AGTGACCAAC CTGCTTTAGT GAAGGGTTGG GGTTTGGAAG GCCCGCTGGA 001760
001761 TACAAGGATC TAGAATGAGG AGGTCTTTTC CTATTGAGGA CCAAAGCTCT CAACTCTTTT TTCCTAATAA ACTAGGAGAG 001840
001841 ACCAGTTTGG AATTGTCTCT AAATGTACAG GATGAGTTTG AGTTTAGGGG TAGCGGAGCC TCTTGTTCCC AACTGAAGGC 001920
001921 ACTCACGAAA CCTGAACTGC ACCCACTTGG AGGAAAGTGA GACGGGGCTT CCCAGTGAGA ACCCAGGGAG ATGCGTCAAA 002000
002001 GGCTACAGAG GGAACAAACA AA
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Predicted Small Protein

Name NONHSAT054174_smProtein_854:1048
Length 65
Molecular weight 6840.0758
Aromaticity 0.046875
Instability index 49.7875
Isoelectric point 8.49456787109
Runs 10
Runs residual 0.00765625
Runs probability 0.0782458929517
Amino acid sequence MITCHTAWLEGQVLRPGCLGSCISCVALGKLLSHILPQFSGLQNGVVRVHQVHAYKEMAA
VPGI
Secondary structure LEEEELLLLLLLELLLLLLLHHHHHHHHHHHHHHHHLLLLLLLLLEEEEEEEEHHHHHHL
LLLL
PRMN LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLL
LLLL
PiMo oooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiii
iiii