NONHSAT054173

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT054173

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2546 nt

Genomic location

chr17+:43723037..43725582

Exon number

1

Exons

43723037..43725582

Genome context

Sequence
000001 tttacagtag gagtttgcaa tcacacagta aaggtcttgg atatatttag ttggagttaa gagcgttggg ctcccataaa 000080
000081 gcagtagggc tctccttgag tttagtttat atatatttag ttggagttaa gagtgttggg ctcccataaa gcggaagggt 000160
000161 tctccttgag tgctgcatca tctgtcttag atcccgattt ccccataatc atgtttatta tcctttccag gttgaagatt 000240
000241 attctctctt ctaaagaaaa tagaagaata ttaggagaaa agacacttga aaatgttcac tcttttattc acattacatc 000320
000321 atctgtcttg aataatgggt ctatctcttt cctgttgctc tggccctgaa aaaaaaatta gctttttaag gctgcttttg 000400
000401 ttacgtgtgc attttcttgt aatcccgtca ttctgggatt taATAATAAT AGTATtaata ccacctacca tttgttggtt 000480
000481 acttactgtg ttttaggcac tgtgctaaac gccttccatg tattcatctc attAGTAAAC ATTTCTGAAA CTATTCTTAC 000560
000561 AATTTGTCTT TTAGTTTTTC TTGTTCTTGT CCTCTTAAAA TCTGAGCTTA GCCATGAGCT CTCAGTGAAG CTGCTTGTAT 000640
000641 TTCTTTAAAA ACCCTCTTTG CTTCCTCCAA GTGGAGTGGG TTGTACTTCT GAGGTCAGGA CAAACTGGGC ACCGGAGGAG 000720
000721 TTCAGCCTTC CGAGGCTGCA GGAGGGGTGG GTCCCCTGAG GCGAGCAAGA TGATGTAAGG CCTTGACTTG GGGTAACAGA 000800
000801 CAGCCACAGA TGGGAAGAGA GAAGCCAACA TTTAACCACG GAAGGATGTG AAGGGCGGAG AGGTGGGTTG AGCACTGGGC 000880
000881 CCCGGGTGCG GGGAGTGGGA AAAGGTCCAA AGGTGAAACC TGGGAAGCCT GGGCTTGGGT CTGGAAGTGG AGAGAAGGAA 000960
000961 GTCGTTCCAG GGGGAGCTGT GAGCAATGTG AACCCATCAT TTCTGTTTTC ACCAGCGAGg gtgagaattg agtccacagg 001040
001041 agtggctccc tcctctgctt cctcgacctg cagagggcta agtggggcaa cgagcagggt aaaacttttc aagatgctct 001120
001121 gctcttagca gaatgagctg ttctgaccat ttcccaagag ccaaatttcc tcatcagtcc tgaatgttgc ctctgtgcta 001200
001201 tgatttgcgt taaaaaaAAG ATACAgtctc cccactgtgt tgtcaaatct gaaataaggg actgtgtttt tgcaaaattc 001280
001281 tcttccaagg ccaagcacag ggtcaatgtt cagcaaatat ttggtgagtt aatgaatGAA ATgaaagcac tctccttatg 001360
001361 ctccttggct gagtgatgtg gagaagagtt ccagaacaat ataatttagt ttctttctcc ttttAACCGA GCCTAGAAAT 001440
001441 TCTCCACAAG GCATATGCAA ATACCCCAGA CATGTATTTT TCCAGGCGTG TGTTTTATGT GCAAATACTC CTGCATATGT 001520
001521 ATGAttttat tttacttttt gagacaaggt tcattgtcca ggcattgtct aatgcaccag tgcattggtg ccatctcggc 001600
001601 tcactgcagg cttgactttc cgagctcagg tggtcctccc acctcagcct cccaagtagc tgggatgaca ggtgcacacc 001680
001681 accatgccca gctaattttt tgtattttta gtagaggtgg ggtttcacta tgttgtccag gctggtcttg aactcctggg 001760
001761 ctctagcaat ctgcccacct tggcctccta aagtgctggg attacaggca tgagcTTCTG CTCATATACG TTACTTGTTC 001840
001841 ATCTGACTGA AGACCCCAAA AGAGACCAGC ACCCCAAAga agcatgtatt tctctttgga accagaagca aacatccttc 001920
001921 tgtttgcttg ggatgcatgg gatgagcatg cagtaggtgt ttaataaata cttgttgact aattaGGGGG CATAAATATG 002000
002001 TAAAAGTGGT AAATTAGCAA GAAAGAGCTG CAGTGTAGAT AATCAAATAA CAAAGTTGTC TAGGACAAGA GAATCTATCT 002080
002081 CTGAGGGCTC TGTGTAGGAG GAGAGGTGGT GTTGGCTAGT GAGGCAGATC TGCCTTCTAA TTAGGCTCCA ATCAGGATAG 002160
002161 TATTGCAATT AGCTCGGGAT ATTATAGCAG TTAGCTTCTA TTCTTGGAAC AAATTCCTGG GAGATTTAAG TTGGGTGGTA 002240
002241 AAAGAAGGTT GTCCCAGGAA TAAATTTGCT GTGAACCGCT TTGGAGTGAC TACTTCATAT GTGCCTAATT GAACCGCCAA 002320
002321 TGTAAACCTG ATTGGATTGT TTCCTTCTTT ATCAGCGACA CTTAAACATG AGCTCAGGAA TTTGGACAGC CACTTAACAA 002400
002401 CAGAACACAG CTCGGGAAAT TGCAGATTTC AAATTTCAGA AAAGTCGATG AATTTAGACA ACTTGAGTGT CTTCTTTGTG 002480
002481 TTAGGGTAGA CAGGCTTTGG CCTCCAAGAT CTGGCTGACA AGTGCTTGCT GCTGAGACAG GCACTG
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Predicted Small Protein

Name NONHSAT054173_smProtein_1454:1750
Length 99
Molecular weight 10646.5442
Aromaticity 0.102040816327
Instability index 50.1164285714
Isoelectric point 8.56109619141
Runs 16
Runs residual 0.0242227732214
Runs probability 0.0608991344286
Amino acid sequence MQIPQTCIFPGVCFMCKYSCICMILFYFLRQGSLSRHCLMHQCIGAISAHCRLDFPSSGG
PPTSASQVAGMTGAHHHAQLIFCIFSRGGVSLCCPGWS
Secondary structure LLLLLEEELLLEEEELLLHHHHHHHHHHHHLLLLLHHHHHHHHHHHHHHHLLLLLLLLLL
LLLLHHHHHHHLLHHHHHEEEEEEELLLLEEEELLLLL
PRMN LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
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