NONHSAT054151

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT054151

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

4358 nt

Genomic location

chr17-:43657904..43662261

Exon number

1

Exons

43657904..43662261

Genome context

Sequence
000001 cgccgcTGCC GCTGCCCACG TCCGGACCCA TCCGGGGTTC CGCTCGCGGC AACGCGGTAG CAGCCCGGGC AGGTGGGTCG 000080
000081 CCGCCAGGCT GAGGTGGCGC CCAAGACGCG CCTGAGCTCG CCCAGGATGG GCAGCAGTAG CCGGAGAAAg ccgccgccgc 000160
000161 cggccccacc ccagcaccag cgccccggcc ggggggaggc gggggcAGCC ACCTGGCCCG GACGGCTGCG GTCTGGAGGG 000240
000241 CTGTCAACAA AGTGGTGTAG GAGGACGCCA GTTACTGCAC GGAAAGCAGC GTCAGGAGCC ATAGTACCTA CAGCAGCACT 000320
000321 CCAGGTACCC ACTCAGCCCA GTTGCTGCAG ACTCCTTCCC CACCTTCTCT GCCCTCCCCC TTTGCTCACT CGTGTGCTGT 000400
000401 GCATCCTGCT CCGATCTCCC CCCAACCCCG CCGACCCCCA GAGGGGAAAT GCGAGGGCAC ATCAAGTGGC AAAAAACCAG 000480
000481 ATTTATAGGA GGAAAGAGGC GCATTGTTCA AAATGGAGAT TGCATTGTTG CAGTTGGCGG GCCACACTCG CTCTCTCTTC 000560
000561 CCGCCTCCCG CCAACCTCCT CTTTTTCCTC CTCAGAATTT GTACCAGTGT AGTGTCTCCA CCGGGCAAGA TTGAAACTTG 000640
000641 GGCAAACACA TATCCATTGC TTTCATTTTT TCCCCTTGTT TTGGTAGTTT TCTGGAATGA AAGAAGCCTC TTGTTTTGCA 000720
000721 AACCTCTTTT CATTTCTAAT GTGGTTCCTT TCGGATTTTT ATTATATATC TGTTCCTTAA AAGGGAATTA AGGATTTGGA 000800
000801 CAGATTGTGT GCCACAATCT GTTTTCACAC CCCTAGCTGT GGTTTTAAAA TTATGTTAAG GAAACGGATC ATTTGGGTTA 000880
000881 GTAGGGGAAC CTTATCTGGT CTTGTGTGTT TGTTTTTATT CTTCGAGTGC TAACGGGCCC GTGCAACAGT TTCTGGTAAA 000960
000961 TGGCTGATTA AAAAGCAAAG CAGAAAGCCA AACAAGACCC AACGAAATTT GGTAATTCAT CTGATTCAAA ATTGTTTTGG 001040
001041 TTAAATCAAA AATTTACAAG ACCGCAGGAA CACGCGTCTT AACTCATTTG ATCGCTTTGC CTTGCTTGGG AAATGCAGGT 001120
001121 TCGTGTCACC TGTTGCAGAA GATGTGTAGT TGATCATCTA GGCATAAGTG CCTAAGATGA ACTTTTGGAC CAACTTCTAA 001200
001201 GTCACACAGC GTCAGTATCA GATTTATTAC ACAACGACTT ATTCTTTTCA CTCTATTTCT GAGGAAAAAG CCCTCCCGAA 001280
001281 ATCCGTAATG AATTTCTCCA TGGTAACCCC TCTTCTGTTT ACACACAGAA AAGTTTCTCT AGGCTGGTGC TGAGATGCAT 001360
001361 TTTGTTAAcc gccccgcccc gccccgcccc gcccAAAGGC TGCTTTGTAT TAAATACGTA GTTGCAGTGT ACTAAATTGT 001440
001441 GAAATTAACA TAACCGAAGC AACAACCGGC AAGACTTGTC CTTTATAATT TTGCAAATCT AAATTAATTA AATTAGAATC 001520
001521 TGGTTTTAAA ATCATTTTTA AAATAAAGTT TATGAGGAAG TATTTGTGAG GAAAAAGGAC CCTTTTTTCC TTGAAGTGAG 001600
001601 GTGTGTCCTG TCTTTCTCAG AGAGACTAGG GTAGTAGAAG TGGTTAAATT GAAAAGTTTC TGTTTTTTAA TAAATGCTTA 001680
001681 AATACTTATT GGAGAAGTAG GGTAGTATTA TATTAAGCCA AATGTAAACC CACGTAGGTT GTCCTAACAT AAACTGAAAA 001760
001761 AAGGTAATTT CTTTTGCCCG ATGGTCAGAA TCCTCGCCAG ACTTGCCCTG GGAGGCTGGC TGGAGAATGA AGGGAATGAA 001840
001841 TCAAATGTCA GATATTTATG TCTTATATGT AAAAAGGAGT ACATGTAAAT TCTTGCCAAC TTAATTTTAG TGCttttttt 001920
001921 ttttttttta aaggagtctt gctctgtcgc ctaggctgga gtgcaatggc gcaatcttgg ctcactgcaa ccttcacctc 002000
002001 ccggactcaa gtgattctcc tgcctcaggc tccccagcag ctgggattac aggcgcccac cagcacgcct ggctaatgtt 002080
002081 tgtattttta gtagagatgg ggtttcacca tgttggccag gctggtctcg aactcctgac ctcatgatcc gcccacctca 002160
002161 gcttcccaaa gtgctgggac taaaggcgtg agccaccgtg cctggGCTAG TACATCTTTT ATAGTAATAA TTTTTACCTT 002240
002241 AAGAAATCAC ATGTTGGTCT TTGTACCCAG AGCCGGTAAT TGAAAcatgg agactggatt gcatacaccc ctggaggaag 002320
002321 ttttttctgg ttagacagag ctgagacatt ttggcagggc agtTCAGCTA ACTTTAAGTC GTATTTGAAG GCCTAGCAAA 002400
002401 TAATATTTAG GATTGATGGC TGTGCATATG CTGACTTAAA TTACAATTTG TAGCTAGGTG TTCTTTAAAA AAATGTGTTT 002480
002481 ACTTTTGATA CTTTTGTGAC Attttgtttt tctttttttg agaaggagtt ttgcttttgg tgcccaggct ggagtgcaat 002560
002561 ggtagaatct cgatcttggc tcaatgcaac ctctgcctcc caagttcaag caattctcct gcctcagcct cccaagtagc 002640
002641 tgagattaca ggcatgcacc accacgcctg gctaattttg tatttttagt agagacgggg tttctccacg ttggtcaggc 002720
002721 tggtctcaaa ctcccgacct caggcgatcc gtctgcctca gcctaccaag gtgctgggcc tacaagcgtg agccaccatg 002800
002801 cctggccTGA GATTTTGTTT TTCTTAATGA CACCTGTAGC CTactgtgtg tctacttgtc ctatccttat atgaaattat 002880
002881 taactctgta gagataggta ttgagcgtat tccctctgca gctcctgtaa gtgttttgca catagcaagt gctcatcaaa 002960
002961 gattggttgg ataaatTATT GTTAGTAGAT GAGAACTTGT AGTACATGAA GTTTCGATAA TTCTACAGTG GGTGTCATAA 003040
003041 CCCCTAAATA TTTTGGATTT AGGAAACTAA AAATTGTCCT AATTGGTTTT TTGTTGTTGT TGTTCTTTTC TAATTGGATT 003120
003121 TTGATGGACA ATTTGATCAG TGAATgtctc gctctgttgc ccagggagga gtgcaatggc acgcacgatc ttggctcacc 003200
003201 acaacctcca cctcccgggt tcaagcaatt ctcctgcctc agcctcctga gtagttggga ctacaggtgc acgctgccac 003280
003281 acccagctaa ttttttgtat tttagtagag atggggtttc accatgttgc ccacactgtt cttgaactcc tgaactcagg 003360
003361 caatccgccc gcctcagcct cccaaagtgc taggattaca ggcatgagcc acctggcctg gccCAGTGAA TGTTTTTCAT 003440
003441 TGCAAGAGTT ACTTTGTTTT TGAGTTGCTA TTTCATATTG CTTGCCAGGC GTTTTCCTTT ATTGGCTGTG ATGTTAATTT 003520
003521 GGATGTTTTA CCTTTTGCAA AGCATTATTT CTTAAGATTA TGGTAAAATG GATGTGACTT ttttttttcc ttatttcttc 003600
003601 taaaaacaaa atggagtaca tgtgcagaac gtgcaggttt gttgcatagg tatacgtgtg ccatggtgga ttgctgcacc 003680
003681 tattgaccca ctctttaagt tccctcccct cgccccccac cccccGGATG TGAGTGACAT TTTGAGTTCC AAACTTTTAG 003760
003761 AACATGCCCA CTTGCCTCGA ATGAGTAACA ACGCGTGACA GTGAGTTGTT TAGGCTAAGT ACTAGTTTCA TTGGTTTTAT 003840
003841 AGTCTGTACT TCCTGGGTGG AAGGCTGTCA GGTAAATGTG TAGATGGAAG AAAAAAATTT TAGAACTGGT TTAAGATATC 003920
003921 TGAATAACAC ACAAAGAAGT ATGATTGATG AATTTGAATC CTGTTGTACT GCAAAGGCTG AAAGAGGAAT TTACTTTATT 004000
004001 GGTAATTTAG AGTAATTTGA TTAATTTTTA TAGTTTACAG CGTTGGCTTA ATTACTGACA TGTGACATTC CTAACATAAG 004080
004081 AAATAACTCC TAATATAAGA AATAACTCAG TATTTTGTAG GTTATATAAC AATGCAGAGG CATTAATTGA TATTACTAAA 004160
004161 GTCATGAAAG GTTTATTTAT TGAAGATTGT TTTCCTTTTA TGGAAAAAAT GTAAGGATGA CAACTTTTTA GTATAAAATT 004240
004241 GCAACCACCT AGTTTTGCTT TAGCCGAAAG CATATGGCTG AATAATGCtt taatttattt ttacttttta aatttaGAAT 004320
004321 TACTTCAGCC TATAGATTTT ATGACATTGC CGATATAA
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Predicted Small Protein

Name NONHSAT054151_smProtein_512:790
Length 93
Molecular weight 10402.3938
Aromaticity 0.152173913043
Instability index 49.2565217391
Isoelectric point 9.01959228516
Runs 14
Runs residual 0.0169690334689
Runs probability 0.0797309914958
Amino acid sequence MEIALLQLAGHTRSLFPPPANLLFFLLRICTSVVSPPGKIETWANTYPLLSFFPLVLVVF
WNERSLLFCKPLFISNVVPFGFLLYICSLKGN
Secondary structure LHHHHHHHHLLLLLLLLLHHHHHHHHHHHHHHEELLLLLEEEELLLLLLLLLLLEEEEEE
ELLLLLLLLLLLEEEEELLLLLEEEEEELLLL
PRMN LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLHHHHHHHHHHHHH
HHHHHLLLLHHHHHHHHHHHHHHHHHHLLLLL
PiMo oooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiTTTTTTTTTTTTT
TTTTTooooTTTTTTTTTTTTTTTTTTiiiii