NONHSAT053245

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT053245

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2522 nt

Genomic location

chr17-:35288324..35293421

Exon number

2

Exons

35288324..35290811,35293388..35293421

Genome context

Sequence
000001 cgcgggggAA GGAGTGGACC GGGAAGCGCC TCGGGTTCCA GAATGACGCT CGGCCCATGG ACAGAGCCTG CCCAGTCACT 000080
000081 CTCGGCTGCT ATTGATCCCG AGGATGATGG CCGCCCCTAG CCATTTCCCT CCTCTCTCTT CGGTTCCAGA ACAGCCCAAG 000160
000161 GAGCAGAAAA GAGTGACAAG GCCGTGAAAG GAGGCGCCTG GGGCGTAGCC GGCTCTAGGA GGTTACCCCA TGCGGAGTAC 000240
000241 ACACCCTGCT ACACCCATCC CGGAGGAGGG AGGAAATAGC CAGCCCGGAG CACCCCTGGA CTCTGCCGGT CCCAGAGGCC 000320
000321 ACGCAAACTC CGCCCAGACT CGGTGAGGCC GCAGTAATGC CACGCAGGGA ACTGCGTGGA TAAGGTCGCT CGGATCTGAG 000400
000401 CGCCAAGGTC TCCCGCCTCT CCTTCCCGTC TAGTTCTCTC CGGACTCAAA TTGCCTTAAT CTCACCCATC ACTCTCTCAT 000480
000481 GGAAATGATC TACTCGTGTG CAGTACTTCA CAGCTTGTAT CACGGTCTCC CCTGAACCGT ATAGCAAGAG GGTGGTGGGG 000560
000561 GGTGGAAGAG AAGGGTACTA TCTCCACTTT CCCGGCCAGG AGGCCCAAGT TAGGAGGCTT GTCCGAGATC CCTAGGTCAG 000640
000641 AGCACTATTT AAGGTGAGAA GTTGGGTGGG GAGCTTGGCA CCTTGCTCCA GTGTGCACTT TGCGCCTGGC CATGTTTTAT 000720
000721 AAGCAAGGGG GGCTTGGGCT GGTTAAGGGG GAGCAGGGAC CGCAGGGCCA GGAAAGGGCA GCATCCGGCA GGCCGGGGCG 000800
000801 TCACGGTATG TGCCTGGCCT GGGTAAACAA CTCTGGCTTC CCACGAGCGC TGGAGGGACC CTGGGCATgg ggcaggggcg 000880
000881 tgggggaggg ggggcagggg cgtggggtgg ggcagggagc gggTGGAACA GCGAGGTCAA GCGTGGAGAT TCCAGTTGCG 000960
000961 AGTCAGCTCC GCACCGCGGA GCAAAGACAG GACGTGGATA ATCTTGGGAG GGAGACGCTG AGCTGAAGAA CAGAAAAGAG 001040
001041 AGATAGAGGC AGAAGTGAGG AGAGAGGGAC AGGAAAAGAA AATAAAGGCA GAAAACCACA GAAAAGATGA GACGGAGTGC 001120
001121 GGAAAAGCAG GCGGGGATAA AGAAAGGAAA GATCTGTCGG GGAAATGCGG GGAGAAGTGG AGGAAAAGAA ACAGAAATTA 001200
001201 GACCCAGAGA GAGACCCTGC CACGAAGAAG GCCGCGGGGA CGGGCGCGGA GCCGAGGGCC CTGCAGGCAC GGAGGGGGCG 001280
001281 TCCCGCGGGT CTGGGGGTGT GCGGCTTTGG GACAGGCGAG TGCGTGCTGA GAGAAAGAGG CAGCGTGTTT GGTGGGAGAC 001360
001361 TCTGCGCCCG TGGAAAAGCG GCTCTGGGCA GGAATCCAAC AAATAAATAA AACGTCTAAG ACGGCGTGAC AACAATGTGT 001440
001441 ATTTGGGTGC GTGCCCGTGT TCCTCTGTCT GAACACCCAG TAAGGAAGAC AAACGGGGCT CGTGCCTCAC AGTAATTAAT 001520
001521 CCTCTCACTA ATTGACTCTC TCCCCTTACC TAATGGCGGC GGTCACTGCC GATATCTGGA GAGACATCAA GTTGGGGGAG 001600
001601 ACAGAGAGAG AGAACCCCAA AGCTAACGAC CTTTGGGACT GAGATTGAGT TTTTTCTGGA CTTGGCAGCT CTAAGCCCTG 001680
001681 CCCCCACCTC CACTTTTGGG CAGAGTTCCA TAGATATTGC TGCCTTCCTT CCCCCTCCAG GTTTTGGGCA GCATTAATAA 001760
001761 AGATCTCCTC AGATTAGGGT GATGTGGTTA CACACACTGA AGCCCTTCTA CCGCCCTCCA CCTTGGGAGA TCAGTTTCAG 001840
001841 AGGCTGAAAG CCACCCCTGT CCCTGGGACA TTTCTTACCT CCCTGCAATA CCAGCTCCCC CTCCCATGTT GTTCCCCCAG 001920
001921 GGGCCCAGAC CCTGCACCCT CTTCTTTCAG GCAGTACTAA CTCTTCCAAG GACCTGGGCG GTGTCCCGCA GTCCCCTAAG 002000
002001 GCAGGTGAGG TTTTGAACGG GCTGAGAAGC AGTCTGGGGT TGATGGAAGG AGAGTGGTGG GAGGTCAGGG CAAGGATGGG 002080
002081 GAGAGGCTTC CAGAGACAAC CTTCCTCAGA CTTGGGTTGA GAGACACAGA GGCGCAGAGA GGCGCAGTTG CCACCAGGCA 002160
002161 AGAGAGAGGC CTCTAGGGAC AAAGGAGGGA AAGGTGGGCT CTATGCACTG TGGGAAGGAG CGCCAAGTGT GTGAGAGGCA 002240
002241 GGAAGGTGGT CATGTCTCTG TGACTGTGAG GGTGACAGTT CTGGTCTCTC TGTGTGAGCA TGGGGAAGCC CCCTATGTTC 002320
002321 CCTCACAGCA CCCTCAGTTC TTAGACTGGG GAGAAGAGGC AGGGGACTGG TCTGGGACTT GATGGTCCCC TTGGTAGCTG 002400
002401 AGTTGGCTGG AAGGGGTCCA ACGCCCACAG TCTGTCTGGT AATGCAGCTT TGAGGCTTAG GTTTGGGAGG TGAATGTCAA 002480
002481 CTCTCACCCC TGTGAGGTGG CAGCTTTGCT CTGTTGGCCT CC
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Predicted Small Protein

Name NONHSAT053245_smProtein_1106:1405
Length 100
Molecular weight 11026.1819
Aromaticity 0.040404040404
Instability index 57.8929292929
Isoelectric point 11.2041625977
Runs 11
Runs residual 0.0225787284611
Runs probability 0.0462896051131
Amino acid sequence MRRSAEKQAGIKKGKICRGNAGRSGGKETEIRPRERPCHEEGRGDGRGAEGPAGTEGASR
GSGGVRLWDRRVRAERKRQRVWWETLRPWKSGSGQESNK
Secondary structure LLLLHHHHLLLLLLEEEELLLLLLLLLEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LLLLEEEEEEEEHHHHEEEEEEEEEELLLLLLLLLLLLL
PRMN -
PiMo -