NONHSAT052821

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT052821

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1248 nt

Genomic location

chr17+:29058652..29103431

Exon number

9

Exons

29058652..29059141,29061915..29061961,29062051..29062115,29070319..29070387,29086509..29086557,29093521..29093606,29095852..29096082,29096890..29096983,29103315..29103431

Genome context

Sequence
000001 GGGGGAAGTG GGCGGAGCGA GGCCTGGGTA GGGTGAGCGG CCTCCGAAGC GGAGCGGGGC TCTGAGGAGA CACTTTTTct 000080
000081 tcctccctcc ttccctcctc tcctcctgcc ttcccttccc ctttcctccc ctctctccTC CTTCTCCCCT CGGTCAGCCG 000160
000161 GAGCCTGCTG GGGCGAGCGG TTGGTATTGC AGGCGCTTAC TCTCCGGGGC CGCCCGGCGA GTAGCTGGCC GGGGAAGGAG 000240
000241 GCAGGAACCG CGATGGCGCC TCAGAAGCAC GGCGGTGGGG GAGGGGGCGG CTCGGGGCCC AGCGCGGGGT Ccgggggagg 000320
000321 cggcttcggg ggttcggcgg cgacggcttc gagcggcaaa tccggcggcg ggggctgtgg aggcggtggc agTTACTCGG 000400
000401 CCTCCTCCTC CTCCGCGGCG TTACCGGTGA AGAAGTCGAA AATGGAGCAC GTCCAGGCTG ACCACGAGCT TTTCCTCCAG 000480
000481 GCCTTTGAGA AGCCAACACA GATCTATAGA TTTCTTTGAA CTCGGAATCT CATAGCACCA ATATTTTTGC ACAGAACTCT 000560
000561 TACTTACATG TCTCATCGAA ACTCCAGAAC AAACATCAAA AGGAAAACAT TTAAAGTTGA TGATATGTTA TCAAAAGTAG 000640
000641 AGAAAATGAA AGGAGAGCAA GAATCTCATA GCTTGTCAGC TCATTTGCAG CTTACATTTT TGGTTTCTTC CACAAAAATG 000720
000721 ATAAGCCATC ACCAAACTCA GAAAATGAAC AAAATTCTGT TACCCTGGAA GTCCTGCTTG TGAAAGTTTG CCACAAAAAA 000800
000801 AGAAAGGATG TATGTTGTCC AATAAGGCAA GTTCCCACAG GTAAAAAGCA GGTGCCTTTG AATCCTGACC TCAATCAAAC 000880
000881 AAAACCTGGA AATTTCCCGT CCCTTGCAGT TTCCAGTAAT GAATTTGAAC CTAGTAACAG CCACATGGTG AAGTCTTACT 000960
000961 CGTTGCTATT TAGAGTGACT CGTCCAAGAA GAAGAGAGTT TAATGGAATG ATTAATGGAG AAACCATGAA AATATTGATG 001040
001041 TCAGTGAAGA GCTTCCAGCC AGAAGAAAAT GAAATCGTGA GGATGGGGAA AAGACATTTG TTGCACAAAT GACAGTATTT 001120
001121 GATAAAAACA GGCGCTTACA GCTTTTAGAT GGGGAATATG AAGTAGCCAT GCAGGAAATG GAAGAATGTC CAATAAGCAA 001200
001201 GAAAAGAGCA ACATGGGAGA CTATTCTTGA TGGGAAGCTA TGGACTAC
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Predicted Small Protein

Name NONHSAT052821_smProtein_944:1111
Length 56
Molecular weight 6620.823
Aromaticity 0.0727272727273
Instability index 60.0363636364
Isoelectric point 10.9631958008
Runs 10
Runs residual 0.030303030303
Runs probability 0.039233350998
Amino acid sequence MVKSYSLLFRVTRPRRREFNGMINGETMKILMSVKSFQPEENEIVRMGKRHLLHK
Secondary structure LLLEEEEEEEELLLLLLLLLLLLLLHHHEEEEEELLLLLLHHHHHHHLHHHHLLL
PRMN -
PiMo -