NONHSAT052670

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT052670

Source

NONCODE4.0

Same with

,

Classification

sense

Length

557 nt

Genomic location

chr17-:27238151..27239804

Exon number

2

Exons

27238151..27238402,27239500..27239804

Genome context

Sequence
000001 CCACACCGTC GGCATCATTG TGAAGACAGA GAATGCCACT GGCCCCAGCT CTTGCCCCCA GAGGAGTTTG GTTCCTGTCC 000080
000081 CAAGCCTGCC CCCTTCCATT CCCAGCTCTT GTGCCAGCAT CGAGAACACC AGCACTTTGC AAAGAAAGAC TGTCCAATCA 000160
000161 CAGATAGGAC CTCCGTTGAC AGATTCAAGG CCACTGGGCT CACCCCCAAA CGCCACCCGG GTGCTCACTC CCCCGCAAGC 000240
000241 AGCAGGAGAT GGTATCTTGG CCACAACAGC CAACCAACGA TTCAGCTCAC CAGCGCCATC GTCAGCTCTA GGAGTTCCAG 000320
000321 AGCCTATGGG TTGAGAATCA AGAAGGGAAC ATCACCTTGG GTCCGAAATC CAGACCTGTC TCAGCAGTGG GGGATTGGAC 000400
000401 GGTGGGTTTC CCTCAGGCGA CGTAAGTAAC AGTCTTCCTG CTCCGTCCCC AGATGGCAAG GTCAGCCCCG GCACGTTATC 000480
000481 CATAGGAAGC GCTTTAACCG TACCCTCTTT CCCAGCCAAC TCTACTGCCA TGGTGGACCT CACCAACTCA CTTCGAG
[back to top]

Predicted Small Protein

Name NONHSAT052670_smProtein_32:166
Length 45
Molecular weight 4781.674
Aromaticity 0.0681818181818
Instability index 83.0068181818
Isoelectric point 10.7178344727
Runs 5
Runs residual 0.0494652406417
Runs probability 0.0447977389153
Amino acid sequence MPLAPALAPRGVWFLSQACPLPFPALVPASRTPALCKERLSNHR
Secondary structure LLLLLLLLLLLLEELLLLLLLLLLLLLLLLLLHHHHHHHHHLLL
PRMN -
PiMo -