NONHSAT052233
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT052233 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
608 nt |
Genomic location |
chr17+:21825297..21826499 |
Exon number |
2 |
Exons |
21825297..21825574,21826096..21826499 |
Genome context |
|
Sequence |
000001 CTGAGGCTTC GCAAAGCAGG AGCCCTCCGT AGCAGGGCTT CGGTGTCGGG GCTCCGAGGC TCCGGCCTGA CTTCTCCACG 000080
000081 GGGTACACAG GAACGTCTCC GGACGCCAGG ACCTGAAATG GGCCGACTAG GATGACGAAA CCACAGGCAG AGTCCGGGGA 000160 000161 AGCAGCGCGG CATCCCATCT TCAGGCCTGC CCGGAGGGTG TTCGGGATCA AGATGACCAC ACTCCAGCCA AGGATAAAAG 000240 000241 CCCCACAGGA GCTCACTGTC CTGCAGGAGA GGAGCAGGCC CACGTCCAAG AAGATGGCTG TATGTTTTCA CGGCTCTTCT 000320 000321 CTGAGAAGTG AAGCCACACC ACGATACAGT CTTGAAGAGG AAGCCAGGAA TGGGAGATGG CAACAAGCCC TGTCATGGTG 000400 000401 GCCTCTCTGA ACAAGTTACC CTTTTGGCAC CCCTCCCCTT ATGCCCGTGG CGGTGGCACA GTGCTGTATC CTGCCTGGGC 000480 000481 TCTGGCCCCT GCTCTGTCCT CCCTCTTACT CTGTCTCCCT TGTTTCTGAG GGGCCTAGAT GCTTCTAGGT CTGGCTGAAT 000560 000561 GTCTTCAAAA AAGATCACTT CCCAGTCCAT CAGGGAGACA GTTGGTGG |
Predicted Small Protein
Name | NONHSAT052233_smProtein_131:409 |
Length | 93 |
Molecular weight | 10604.0818 |
Aromaticity | 0.0760869565217 |
Instability index | 78.7684782609 |
Isoelectric point | 10.8595581055 |
Runs | 13 |
Runs residual | 0.00609946825149 |
Runs probability | 0.0383120677239 |
Amino acid sequence | MTKPQAESGEAARHPIFRPARRVFGIKMTTLQPRIKAPQELTVLQERSRPTSKKMAVCFH GSSLRSEATPRYSLEEEARNGRWQQALSWWPL |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLEELEEEELLLLLLLLLLLLEEEEELLLLLLLLEEEEEE LLLLLLLLLLLLLHHHHHHLLHHHHHHHHLLL |
PRMN | - |
PiMo | - |