NONHSAT051902
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT051902 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1751 nt |
Genomic location |
chr16-:1025761..1031318 |
Exon number |
4 |
Exons |
1025761..1027093,1029025..1029110,1029601..1029758,1031145..1031318 |
Genome context |
|
Sequence |
000001 CTCTCTCTCT CTCTCACACA CACACACACA CACACAGCCC GTCTCGCGCC TGAGGTCTCG CCCGCAGGCC GGTGGCGCGG 000080
000081 GGTCAGCTGC TGCCTGCGGT CCAGGACAGG GTCGGTTCCG CCGCGCAGCG CCCAGGCCCA GCTCGTCCAG AGTCTGCGGA 000160 000161 CAGCGCACGT CCAGACATCG CCCACTCGGG CTCACAGTGC CATCCGGGTG AGGACCTCCG TGGAGAGCTC TCTTTGCCAA 000240 000241 AGAAAAGCAG TTGCATTAGG TCTGCGAGCA GGCAGGGTGG CCTCTTCCTG GCTCCCCATC CACCAAGGAA GCTTCAAGTC 000320 000321 CCTGGGACAC AGGCACTTTC CCACACAGGA TGGAGCCGGG CCACCCTCAC AGCTCCTGCC CTGCAGACGC TGGCCTTGTG 000400 000401 GAGGGAGGCA GGCAGCAGGA GCAGTGCTTT CTGGGCCTCT GTAGCCAGAG CTGGCCCTGC TGCAGCTTAC GTCTGCCTGC 000480 000481 AGCCCAGACG TCCTCCTGGT CCTCCTGATG CCCCCGACCT CCACGGAGGA CGAGCATTTC CAGCCCAGCC CTCCCCATCT 000560 000561 TCACCTCGCA CTCCCCTGAC ACACTGGGAG CCTCCTGATC CATGAACCCG CGCTGGCGGG AGTAGCTACT GACCGCTGGG 000640 000641 GACCCCTGCC CAGGCTGTTC GCATGTGGAA AGGATTCAGG GAGCAGGCGA TGCCCAAAGC GTGGAGACCA GCACTGCTCT 000720 000721 CTCCCCAGTG ACAGGTGCAC GCCCAGATCA CGGATGTGTC GGGAACAGCT GTGCTCCTGC TGCTCAGCGT CCGTCACTCC 000800 000801 AGGCTGGGAG CGGGTCCCCA AGCTTCTGGC TGGGCCTATC CGTCTCCACT CTCAGTGTGG GGGTGGGGGG CGCCAACAGC 000880 000881 ACGCATTTGC TCTCTGCACT TCTCGTCTGA TAATGGGCAG AGGGTCCTTC TGCAGCCCCA AAACATCCCT AGGCAGGAGC 000960 000961 CCTGGGGCCC CAAGCAGCCA GGGAGGTGAG CACCAAGGAC CTCCCAGAGA GCGTCACCTT CCGTCGAGGG AGGCCCAGCC 001040 001041 TGGGGGCGGT GTCTGAGACT TGGAATCAAC GCTTCCGTTG GTGGCAGTAA ATCCTGTCCC TAACCCTGCA GTACAGCTGT 001120 001121 GCCGTGTACA GGAGGGTGCT GTCTGACGCC AGACACCTGG ACTACAGATC GCAGCCTGAT TCCTGGTCAT TGCTCCACTG 001200 001201 AACCCCAGAC CCCAGCCTCG TTCTGGGCCC TCATCCCCTA GATCCAGGGA CCCCAGCCCC ATTTCAGCCC TTGGGCCCTT 001280 001281 GTAGGATGCG AGGCCCTGGG CCCCAGCCCC CAGCCCATCC GTGGCCCAGG CACTGGGGGG CTGAGGTCCT CTGAGAAGGG 001360 001361 ACACAGGGCC TGGGGGGCTC TCTCAGCCCA TCAGCAGGAG AGGACTGACT CCAGAAAAAT CAGCGTTTGT ACCCACTCAG 001440 001441 GCTGCCAAGA CCTGTGTCCG TCCTTCCAAG CTCAACCTTC AGAGTTCATG AGGCCCCTTG CCCAGAATGT CCACAGAGTT 001520 001521 CATGAGGCCC CTTGCCCGGA ATGTCCACAT TTGAAACCTC CCAACACCGA GCCCCATTTC AAGTATAACC AGGAGGGAAA 001600 001601 ATGGTGCTTG AAATAAGCAT GCCACAAAGG AAAACCTGCT TTCTCGAAAT GGGCCCTGGC CGCCCAGGCC CTGACCTCCC 001680 001681 CGGCCAGGAT GGAACGTTCC AGAGACCCAT TAGTGCCAAA GGCAAATGAA AACACACCCT GTGAAAATGT C |
Predicted Small Protein
Name | NONHSAT051902_smProtein_1487:1615 |
Length | 43 |
Molecular weight | 4961.6891 |
Aromaticity | 0.0714285714286 |
Instability index | 44.319047619 |
Isoelectric point | 8.59368896484 |
Runs | 7 |
Runs residual | 0.00949367088608 |
Runs probability | 0.0 |
Amino acid sequence | MRPLAQNVHRVHEAPCPECPHLKPPNTEPHFKYNQEGKWCLK |
Secondary structure | LLLHHHLLHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEL |
PRMN | - |
PiMo | - |