NONHSAT051768
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT051768 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1017 nt |
Genomic location |
chr16+:456895..462487 |
Exon number |
5 |
Exons |
456895..456952,460243..460404,460691..460784,460972..461076,461890..462487 |
Genome context |
|
Sequence |
000001 aaccactgtg cccagccGGC ACCAAAACTT GCACCTATCC TAAATATGGA GCTTCAGTGT GCGGCCGGGA ACTTCCTGTG 000080
000081 CCCCGCTGGC GCCTTGTCCT TCAACGCCTT CAAGACCGTG ATGGACATCG ATACCAGCGG CACCTTCAAT GTGTCTCGTG 000160 000161 TGCTCTATGA GAAGTTCTTC CGGGTGGGTG CCTCGTGCGC TCTGTGAGAA GTTCTTCCGG GACCACGGAG GGGTGATCGT 000240 000241 GAACATCACT GCCACCCTGG GGAACCGGGG GCAGGCGCTC CAGGTGCATG CAGGCTCCGC CAAGGCCGCT GTGGACGCGA 000320 000321 TGACGCGGCA CTTGGCTGTG GAGTGGGGTC CCCAAAACAT CCGCGTCAAC AGCCTCGCCC CTGGCCCCAT CAGTGGCACA 000400 000401 GAGGGGCTCC GGCGACTGGG AATCTTCCGG CCGCTGCTTC CTGCCGCCTC ACTCAGCCAG GTGGAGAGCA CCAATCTGAA 000480 000481 CCAGCAATGC CTGCAGCCCA GCCCCTCCTC TGAACACTCA GCTATTACTG CGCTTTCCCT CCCCACGGCC CCAACTCCAG 000560 000561 GGCAGGAGCA ACTGGACAGT GGGCCTGGCC CGTGGAGCTG CCACGCAGGT GCCTGAGGGC CAGGTGCCAC GCAGGTGTCT 000640 000641 GAGGACCAGG TGCCACGCAG GTGGTGGGGG TACAGACAAG ATGCTGGGAT GTCCCCTGCC CCATGGTCAA GGGTGTCCTG 000720 000721 CCTGCCTGGG TCCAGGGCCT GAGGGAGCCA CATGGATCCC GAGACTTGTG TTCTCTTGGC TGAAAACACT GAGGTGCTCC 000800 000801 CATCTGTGCG TGGCCCATGA GCTGGGATGG TCCTCCAGCT GCCCACAAGG TCCGCCCCTC TGTCTCTGCA CCACCTGTTT 000880 000881 GCATAAACAC ACTTTGCTAC AATCTTGCTA GTGCGTTTTC TTAAAAGATA ATCTATTTAC TGTAAAAATA AATTGGACTT 000960 000961 TGCAAAAGCT TTTAGAAGGA AAAGAAAGAG GATTAAAGAG AATTGCTGGT GATCCTA |
Predicted Small Protein
Name | NONHSAT051768_smProtein_680:910 |
Length | 77 |
Molecular weight | 8137.6045 |
Aromaticity | 0.0526315789474 |
Instability index | 70.1355263158 |
Isoelectric point | 8.08770751953 |
Runs | 9 |
Runs residual | 0.0229885057471 |
Runs probability | 0.0473120179003 |
Amino acid sequence | MLGCPLPHGQGCPACLGPGPEGATWIPRLVFSWLKTLRCSHLCVAHELGWSSSCPQGPPL CLCTTCLHKHTLLQSC |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHLLLLLEEELLLLLLLLLLLLLLLL EEELLLLLLLHHHLLL |
PRMN | - |
PiMo | - |