NONHSAT051077
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT051077 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1745 nt |
Genomic location |
chr15-:100513161..100516484 |
Exon number |
3 |
Exons |
100513161..100513680,100513778..100514767,100516250..100516484 |
Genome context |
|
Sequence |
000001 ATCATCCCAG TCCCTTGACC TCATGTCAGC CCCACTCAGG CTGTCCTGTC TCTGCAGTGC TCGTCGACCT GCGGGAAGGG 000080
000081 CCTGCAGTCC CGGGTGGTGC AGTGCATGCA CAAGGTCACA GGGCGCCACG GCAGCGAGTG CCCCGCCCTC TCGAAGCCTG 000160 000161 CCCCCTACAG ACAGTGCTAC CAGGAGGTCT GCAACGACAG GATCAACGCC AACACCATCA CCTCCCCCCG CCTTGCTGCT 000240 000241 CTGACCTACA AATGCACACG AGACCAGTGG ACGGTATATT GCCGGGTCAT CCGAGAAAAG AACCTCTGCC AGGACATGCG 000320 000321 GTGGTACCAG CGCTGCTGCC AGACCTGCAG GGACTTCTAT GCAAACAAGA TGCGCCAGCC ACCGCCGAAC TCGTGACACG 000400 000401 CAGTCCCAAG GGTCGCTCAA AGCTCAGACT CAGGTCTGAA ACCCACCCAC CCGCAAGCCT ACCAGCCTTG TGGCCACGCC 000480 000481 CCCACCCGGC TGCCACAAGA ATCCAACTAC ATAGAACATG AGCGTGGACT TGGCGTTTGC CATTAGTGCT TCCGTACTTA 000560 000561 ATATATTGTT AACAGCCACT GGCTGGCTTT CTACAGTGAG GAGAAAGTAG GCATGAGTCA CAAAGTAACT TCAATTTCTA 000640 000641 GGATTTCAGG TACCTCGAAG GGAAGCACCT CTGGCAGACA ACCGTCAAGA GAGAGACATC ATTTAGTGTT CTTGTCTTGA 000720 000721 CTCGCTTTTG ACATTTGAAT TTCCAGTGCT TGGTATATCA TGGAGGAAAC ATCCCCAAAA CGAGACATGC TAGAAAAGGC 000800 000801 TTTATTCTGA AAGCCGGCGA CACCATGGAG GGAGGGGCAG GTGTTGGTGA GCCTCTGCCC GTGGCTTCTC TGGGGAGGGC 000880 000881 CGGGCTGCTT AGCACACGTT TCTCTCCATC TACCTTCTTG ACCACATGAG AACCAGGACG TTGCCTCCAT GCCCGTCTCT 000960 000961 GAGAACATAG TCTCTAAATC CTAGGTGTTG CCTTGGAAGT CTCGTGCGTG GAGTGTAAAT CTATATATGC CAGCGAGGAC 001040 001041 AGCAGTGCCA CGCAGTTCAT ACCACCCGCA TGGGAAGAAT GTTCCAAGAG AGTCTGGGTT TGGGGAAGCA TCTAATTTTC 001120 001121 AGAGCTCTGC TGTCCACCGT GTAGGGAAAC AGAAGGGCCT CTCTTCAAGG TGCTGTGACA TAAGAAACGG TAATTGCGGT 001200 001201 GATGGGGTTG CTTCCTAAGG CAAAGAGATG CTGTACCACA TCCCAGTGGC TTTCTACCGA CCGTGGCCAT TTATCTGAAG 001280 001281 GTAAGACGAC ATTTGGGACC TCTGAGGACA CAAGCCCAGG CCTAGGATCT GTAGAGCAAG GCCTGACTGC TCTATCCTGG 001360 001361 CACGGAGCAG CCTGATGTGC CAGGACCAGG GGAGGAACGC CATCTGGCTG GCACTGCTGC ACACCCGCCG AGCCTTCCTG 001440 001441 TAGCCCCAGA CTTTGTGGTA CCCATTATCA TCACGCCTGT CATCATTGAC CCATCTTCTT GGTGGGGCAA GGATGATGCA 001520 001521 TGATGAAGGA AGGTCCTTCC CCCCTGCAGC CCCCTTACGC CTGGCAGCAG ACAAGCAGAG TGGCCTCTTT GAGAGCACAG 001600 001601 AGGATGGTAG CACCCTACCT GCAAGGAGGC CGGGCAGGGA CCCTAGATGC CAGGAGGCCT GTTTTGCTCA CCAACTTGGT 001680 001681 GGGCATTTCA TGGGTGCTTA TGTTCTAGGA CTTTACCGTA AATAACACCT CCTCCCTGAT TTCAG |
Predicted Small Protein
Name | NONHSAT051077_smProtein_251:520 |
Length | 90 |
Molecular weight | 9727.2584 |
Aromaticity | 0.0112359550562 |
Instability index | 80.6325842697 |
Isoelectric point | 11.2041625977 |
Runs | 12 |
Runs residual | 0.00837188808107 |
Runs probability | 0.0396131425543 |
Amino acid sequence | MHTRPVDGILPGHPRKEPLPGHAVVPALLPDLQGLLCKQDAPATAELVTRSPKGRSKLRL RSETHPPASLPALWPRPHPAATRIQLHRT |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLEELLLLHHHHHLLLLLLLHHHHHHHHLLLLLLLLEEE LLLLLLLLLLLLLLLLLLLHHHHEELLLL |
PRMN | - |
PiMo | - |