NONHSAT048436
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT048436 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
557 nt |
Genomic location |
chr15+:91432780..91434252 |
Exon number |
5 |
Exons |
91432780..91432866,91433070..91433192,91433322..91433508,91433596..91433714,91434212..91434252 |
Genome context |
|
Sequence |
000001 CGATGAGTCA CTGCTTGAGG AGGGTGAACC GCTGGAGCCT GGGGAGCTCC AGCTGAACGA GCTGACTGTG GAGAGCGTGC 000080
000081 AGCACACGCT GACCTCAGTG ACAGATGAGC TGGCTGTGGC CACCGAGATG GTGTTCAGGC GGCAGGAGAT GGTTACGCAG 000160 000161 CTGCAACAGG AGCTCCGGAA TGAAGAGGAG AACACCCACC CCCGGGAGCG GGTGCAGCTG CTGGGCAAGA GGCAAGTGCT 000240 000241 GCAAGAAGCA CTGCAGGGGC TGCAGGTAGC GCTGTGCAGC CAGGCCAAGC TGCAGGCCCA GCAGGAGTTG CTGCAGACCA 000320 000321 AGCTGGAGCA CCTGGGCCCC GGCGAGCCCC CGCCTGTGCT GCTCCTGCAG GATGACCGCC ACTCCACGTC GTCCTCGCCT 000400 000401 GGCCACCCGC TGACGTCTGT CCCTGGCCTC AGGAGCAGGA GCGAGAGGGG GGAAGGACAC CCACGCTGGA GATCCTTAAG 000480 000481 AGCCACATCT CAGGAATCTT CCGCCCCAAG TTCTCGCTCC CTCCACCGCT GCAGCTCATT CCGGAGGTGC AGAAGCC |
Predicted Small Protein
Name | NONHSAT048436_smProtein_104:268 |
Length | 55 |
Molecular weight | 6259.35 |
Aromaticity | 0.0925925925926 |
Instability index | 112.196296296 |
Isoelectric point | 11.1757202148 |
Runs | 8 |
Runs residual | 0.0145438121048 |
Runs probability | 0.031399046105 |
Amino acid sequence | MSWLWPPRWCSGGRRWLRSCNRSSGMKRRTPTPGSGCSCWARGKCCKKHCRGCR |
Secondary structure | LLLLLLLLLLLLLLEEEELLLLLLLLEEELLLLLLLLLLLLLLEEEHHHLLLLL |
PRMN | - |
PiMo | - |