NONHSAT047429
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT047429 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1495 nt |
Genomic location |
chr15-:77516250..77517746 |
Exon number |
1 |
Exons |
77516250..77517746 |
Genome context |
|
Sequence |
000001 GTTAATGAAA TAAATTGTCT GCTATATATA GGTTTTGTGT GAACATACAA ATGAAATGTA CTGTCTCAGA ATAATGTGGT 000080
000081 TGGGGAAATA TCTGGAGACA AATACAATGC AATTGCAACA TAACAGTTAC ACACCAGACT CTTAACAGGA ATAATGTAGT 000160 000161 GTGATACTTG AAAGCCTAAA CTCTGAAATG AGATTGCCTG AGCTGAGATC TCAATTCCTC TAACTATGTA ACCCTGGGCA 000240 000241 AGTTACTTCA AAGTGCCTCC GTTTTCTTCT CTGCAAAATA ACCATTGATT TGAAATGTGG AGGATTTTGA AACCTAAGCT 000320 000321 AAGAAATGTG GGTTTGATAT GCTGAAAAAT AGGGAGCTAC TTAAAATTTT TGAACAAGCA AGTCACATGA TGAAATTAAT 000400 000401 TGAGGAACAT TGTATTTGTG ATTGCATATG GATGGAGTGG GAGGACCTAG AGGCAAAGAC ATTAGATAGG AGACCACCAG 000480 000481 AACAAACTAG ACGTGAAAGG TGCAGCTGTG GAAATGGAAA GAGATGGGCA AAACCAAAAA TCACCACAGA GAAAAAAAAT 000560 000561 CATCCAGATT TCATGATAGA TTGGATGTAT TTTGAAACAC CTCTCTCCAT ACAAATGAAA TAATTCAGCA AAATTCTAGA 000640 000641 AAATGCTGGT GTAGGAGCTC AGTGGAAATC TCCCGTAAGT GCTGTGAGAA ATTATAAATT CTGGGGACTC CAGCTGATAC 000720 000721 AGTGTGCATT CACTTACAGC TTCCTTTGCC CCTTTGTACA CTAGAGCACA ACAGGAAATA TTGGCTTATC TCTGTAGGAA 000800 000801 GTGTCTCTAT AGGAGTTGCT TACTGAACTG AATATCTTTG TTTAGAACTA ATTGACCTTT CTAAAACAGC ATTTTTAAAG 000880 000881 AGCTTACTCA AATAAGGCAG ACTTTAACCA TCTGATAAGT CAGAGACAAA TCAGCCCTCT TCTAAGCAAG GTTGACAGTC 000960 000961 AGTGCAAGAG AAAAGAAAGC ACAGAAAGAA AGGCACCATC AGACAAAAGA ACAGTGTATT AGTAAAAACC AGATAATTAA 001040 001041 GAAAATTTTA TTTAATGTGA ACATTGAATT CTAACACAAA TCCTTTTCCT GCATTATGAT AGTATCTGTG TGAACCAACC 001120 001121 TTTTTTCAGC CCTTTTTGTT ATGGAATGTT AAGAATGTTA GTTTACAAGG TTATAAAGTA GAAGAGTCTA ATTAGAAACC 001200 001201 AGAAAATATC TCAGTCTTTT GGTCTGAATT TGTTTTCCTT TGGTTAGATT CTTAAAGTAG AAAAAAAAAA ACTACTACTT 001280 001281 ATTTTGTAAA CATTTTGAGG ATTTTGATTC AGATATTTTA AATTATTATG AGAGATAAAG AATAACCCTG TCCAAAAAAG 001360 001361 TAAGAAAATG AATAAAATTT GTTTAAAAGA GGATTCTCTT AAAATATAAC CAAAGGGACA GATTTTGACA GCAGTCTTCA 001440 001441 TTGTTGTTCC ATATGAGTGT TTTCTAAACC TAACAGATGT AAGCAATAAA TAAGT |
Predicted Small Protein
Name | NONHSAT047429_smProtein_338:622 |
Length | 95 |
Molecular weight | 11474.3333 |
Aromaticity | 0.0851063829787 |
Instability index | 51.2595744681 |
Isoelectric point | 7.64166259766 |
Runs | 13 |
Runs residual | 0.00948196114709 |
Runs probability | 0.0425719837485 |
Amino acid sequence | MLKNRELLKIFEQASHMMKLIEEHCICDCIWMEWEDLEAKTLDRRPPEQTRRERCSCGNG KRWAKPKITTEKKNHPDFMIDWMYFETPLSIQMK |
Secondary structure | LLLLHHHHHHHHHHHHHHHHHHHHLLLLLEELLHHHHHHHHLLLLLHHHLLLLLLLLLLL LLLLLLLLLLLLLLLLHHHHHHHHLLLLLLLEEL |
PRMN | - |
PiMo | - |