NONHSAT046894
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT046894 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1237 nt |
Genomic location |
chr15-:68775568..68779779 |
Exon number |
4 |
Exons |
68775568..68775972,68777166..68777439,68778828..68779105,68779500..68779779 |
Genome context |
|
Sequence |
000001 GGAGAGAAGG CCATTCTGAG GTCAACTGAA ACCTCACTTG AGGGGCAGTT CCGTAGATGG GAATGAGGAG AGAGTCATGG 000080
000081 CCACAGCCAC CTGGCCAAGG AGAGAGGCCA TAACTGCCAG ACAGAACCAA GGATGGAGGG ACTTCAGCAG CACGAACAAT 000160 000161 CCACACTCAG CATGGGTCAC TCTCTGGGAC ACACATTTCC CTCTGGCTGA AAGGCTGAGC TGCTCCAGGG CCAACTGTGA 000240 000241 GGTCAGACAG CTGCCCAGGG ATGTCTCCAG CCACTCAAGG GAAGAAGAGA CCACTCACCT GTAATTTCAA CAGCAACAAA 000320 000321 AGACCTGAGG TTCCACCATC AGAACTTCAC GCCCTAAGGA AGATGCAGCA TTTCCTGTAA AATGCAAGTG CTCCCAGGCA 000400 000401 GAGGTAGCTC CCGAAGCCAT GATCAGTTAT GTATACCTTA GTGGCAGCTG ATTAACAGAC TCTTCCCCAG AGCCAGCTGA 000480 000481 CAGGAAGCAC ATCGGGGTAA AAGGGAAGAT GAAAACTTGG GTGCCTGGAG GAAGGGAACA AATGCGAGCA GGAGCATGAG 000560 000561 CCAGAATTGA TTTCGTGGCT TTCTTTCTCC TCTTCTGGGA TTTTGTGCCC TATTGCCACA GAAACCCTGG GCCCCTTCCC 000640 000641 CAGCTGTCAT GAAGGTGCCT GAGTGATGGT CAGAGAGATG ACCGGAGGGG CCCACCCGGC CACCGCAGCA GCAGCAGCCA 000720 000721 AGGCGGGACT AAGCCTCCAC ACCCCACATC TCAGTCGTGG CCAGCCCGGG ATGCCTGCCT CTCCTGCCCT GTGGTGTTGC 000800 000801 TGTCCTCATA TGACCCTTCA GTCCCCCGAC ATctggacag gctttaggga cctgcttgag cagaacatgg tagaagtgat 000880 000881 ggactggggc ttctgaggct aagccataag aagccttgag aatttcacct ggccctcact gtctctggga gccctgagcc 000960 000961 atgatagaag aagtccttcc tatattgaat gtccttgaga cctccagtac tggaaagggc atttgtagat gctcagacca 001040 001041 acagtccaaa ctgagcccag tctgccaact tgccctgcca aggtgtcaga tgcatatgtg aatgagacca tcctagacct 001120 001121 gctgatagcc catcacccgg ctgactgcta ctgagtaacc tctgccaact tcacgccgaa cacagaactg ctgatttgaa 001200 001201 ctctgcctga atttcttggc ccacagaaca atgagat |
Predicted Small Protein
Name | NONHSAT046894_smProtein_665:895 |
Length | 77 |
Molecular weight | 8190.4053 |
Aromaticity | 0.0657894736842 |
Instability index | 47.7144736842 |
Isoelectric point | 5.99237060547 |
Runs | 8 |
Runs residual | 0.036146400484 |
Runs probability | 0.0345676558912 |
Amino acid sequence | MVREMTGGAHPATAAAAAKAGLSLHTPHLSRGQPGMPASPALWCCCPHMTLQSPDIWTGF RDLLEQNMVEVMDWGF |
Secondary structure | LLLLLLLLLLHHHHHHHHHHLLLLLLLLLLLLLLLLLLLHHHEELLLLLLLLLLLHHHHH HHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |