NONHSAT046765
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT046765 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
879 nt |
Genomic location |
chr15-:66108640..66109819 |
Exon number |
2 |
Exons |
66108640..66109201,66109503..66109819 |
Genome context |
|
Sequence |
000001 AGAACCAGAA CAGCAGAGGA AGCTCTTCAC TGGAGGGTTG AGCTTGGAAT GAGAGCCTGA GGAGCCATTT TGAGCAATGG 000080
000081 GGAACGCTCA CAGACTGTGT GGTAATGAGA GATCCAAGCA CCAAGCGCTC CAGGGGCTTA GGGTTTGTCA CATATGCCCC 000160 000161 TGTGGAGGCA GTGGATGCAG CCGTGAATGC AAGGCCACGC AAGGTGGATG AAAGAGCTGT GGAAACAGAG AGCTGTCTCA 000240 000241 AGAGAAGATT CTCAAAGACC CAGTGCCCAC TTAACTGTGA AAAAGATATT TGTTGGTGGC ATTAAAGAAG ACACAGgACA 000320 000321 CTGAAGAACA GCACCTAAGA GATTATTTTG AACAGTATGG AAAAATTGAA GTGATTGAAA TCATGACTGA CCGAGTCAGT 000400 000401 GGCAAGAAAA GGGGCTTTGC CTTTATAACC TTTGACTACC ATGACTCTGT GGATAAGACT GTCATTCAGA AATAACCATA 000480 000481 CTGTGAAGTT AGGAAAGCCC TGTTAAAGCA AGAGATGGCT GGTGCTTCAG CCAGCCACAG AGGTCAAAGT GGCTCTGGAA 000560 000561 ACTTtggtgg tagtcatgga ggtagtttcg gtgggaatga caattttggt catggaggaa acttaagtgg tcttggtggc 000640 000641 tttaatgaca gctctggtgg tggtggatat ggtggcagtg gggatgggta taatggattt agtaatgatg gaagcaattt 000720 000721 tgggggtggt ggAAGCTACG ATGATTTTGG CAATTACAAC AATCGGTCTT CAAATTTCAG ACCCATGAAG GGAAGAAACT 000800 000801 TTGGAGGCAG AAGCTCTGGC CCCTATGGTG GTGGAGGCCA ATACTTTGCC CAACCACGAA ACCAAGGTGG CCGTGGCGG |
Predicted Small Protein
Name | NONHSAT046765_smProtein_104:304 |
Length | 67 |
Molecular weight | 7610.6359 |
Aromaticity | 0.0757575757576 |
Instability index | 62.3242424242 |
Isoelectric point | 9.12652587891 |
Runs | 11 |
Runs residual | 0.0160587915079 |
Runs probability | 0.0277657336481 |
Amino acid sequence | MRDPSTKRSRGLGFVTYAPVEAVDAAVNARPRKVDERAVETESCLKRRFSKTQCPLNCEK DICWWH |
Secondary structure | LLLLLLLLLLLLLEEEELLHHHHHHHHLLLLLLLLLLEEELHHHHHHLLLLLLLLLLLLL LLEEEL |
PRMN | - |
PiMo | - |