NONHSAT046699
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT046699 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
1839 nt |
Genomic location |
chr15-:65244342..65248504 |
Exon number |
3 |
Exons |
65244342..65244428,65246254..65246341,65246835..65248504 |
Genome context |
|
Sequence |
000001 GCTATCCTCT GAACCAATTT CCTTCGGTTT AATGTACCTG TATCTTGGGG TTTTTTTCCA CTTAATTTAT CCTGGAGCTC 000080
000081 TTTCCATAAC AACACTTGGA AAGCACTCTC ATCCTTTTTT CACTGCTGAA CAGAATTCCA CTGTGTGGAT GGAACATACT 000160 000161 CTATTTCACC AGTCCCCTGT AACCAGTCAC TTGGTTTGTT TCCAATCTTT TGCTTTTTCA GAGTAATAAC CTTGTATGTC 000240 000241 TATCATTTTG TATGCATACA GGTTTATATG TAGGAAAAAT TCCTAGAGTA GGATTGCTGG ACCAATGGAT AAAAGTATAT 000320 000321 TGTGGACAGA CAATGCCAAA TTGCCTTTCA GAGACTGTGG CCCTGTGCAC CCCATCAGGC ATGTGTGACT ACCAAAGCTC 000400 000401 CTGTCAGCTG TTTTATTTTA TCTCCTTTCC AGTCTCAGGC TCAATGCAGA ACTTTGAGGT AAGCTTTTCT AAAATGTAGG 000480 000481 CTCCTAAACG CCACAGCCAG CTCTGCCACA TGAAGGAGAG CTCAAATGAG ACAGAAACAG CCTCTGGGCA GGATTTCTAT 000560 000561 CCTGCACAGA TATATTTTCC ACATTCTGGG AAACCGTGAA GCTTCCAGAG CCACAATTCC CCAGAAACAC ATCCCCCTGC 000640 000641 TGGTACAGCC AAGCCCCAGA ACAAGCTGTG CTTGCCTGGC ACCTCAAAGC CAAGCACCAT GGATGCCACT TGCCATGGGT 000720 000721 GCCTGCAATT TCAAATAATG AGAAATAAGA AATTTCAGCT TCTCAGTCCC TCTAGCCAAC ATTTCAGGTG CATGACAGCC 000800 000801 TCAGGTGGCA AGCAGCTACT CTGCCGGACA GGGCAGAAGA TGGAACACCC CATCCCTGGG GAAGATCACG AGGTCAGGAG 000880 000881 ATCAAGACCA TCCTGGCTAA CACAGTGAAA CCCCGTCTCT ACTGAAAATA CAAAACATTA GCTGGGTGTG GTGGCAGGCA 000960 000961 CCTGTAGTCC CAGCTACTCA GGAGGCTGAG GCAGGAGAAT GGCGTGAACC TGGGAGGTGG AGGTTGCAGT GAGCCAAGAT 001040 001041 TGCGCCACTG CACTCCAGCC TGGCAACAGA GTAAGACTCC ATATCAAAAA AAAGAGAAAA GAAGAAGAAG AAAGAAAGAA 001120 001121 AGAAGAAGAG GAAGAAGAAG AAGTGGAAGA AGAAGGAAAG AGGAAGAGGA GAAGCAGGAG AAGAACAAGG AGAAGAAGAA 001200 001201 GGAGAGAGAA GAAGAGACAA GAAGAAGAAG GAGAAGAAGG AGAGAGAAGA GACAAGAGAA GAAGGAAGAA GGAGGAGGAG 001280 001281 AAGAAGGAAG AAGAAAAGAA GGAGAAGAAA GAAGAAGGAA GAAGAAAGAA CAACAAAAAG AAGGAGAAGA ACAAGGAAGA 001360 001361 AGAACAACTA AGGAGAAGGA AGAAGGAGAA GAAGAAAGAA GAACAAAAAG AAAGAAGAAA GAAGGAGAAG GAAGAAGAAG 001440 001441 GAGGAGGAGG AGAAGGAGAA GAAGAAGGAG AAGAACAAGG AGAAGGAGAG AAGAAGAAGA GACAAGAAGA AAGAAGGAGA 001520 001521 AGAAGAAGGA AGAAGAAGAA AAGGAAGAAG AAAAGAGGAA GGAGGAGGAA GAAGGAGAAG AAGGAAGAAT AAGGAAGAAG 001600 001601 GAGAACAAGG AGAAGGAAGA AGAAAAGAAG GAGAAGGAGG AAGAAGGAGA AGAAAGAGGA GAAGAAGGAA GAAAGAAGAA 001680 001681 AAAAGAAACA ATAGAAGAAG AGGAAGAAAG AAAAGAAAAA AGAAAAAGAG AAGAAAGAGG GAAGAAAGAA AAGAGGAAGA 001760 001761 AGAATAAGGA AGAAGAAGAA AAAGAAAAGA AAAGAAGGAA GAAGAGGAAG AAAGAAGAAG GAAGAAGAAA GGAAGAACT |
Predicted Small Protein
Name | NONHSAT046699_smProtein_251:478 |
Length | 76 |
Molecular weight | 8402.7396 |
Aromaticity | 0.133333333333 |
Instability index | 48.8614666667 |
Isoelectric point | 6.49957275391 |
Runs | 14 |
Runs residual | 0.0377304964539 |
Runs probability | 0.0457642516466 |
Amino acid sequence | MHTGLYVGKIPRVGLLDQWIKVYCGQTMPNCLSETVALCTPSGMCDYQSSCQLFYFISFP VSGSMQNFEVSFSKM |
Secondary structure | LLLLEEEELLLLEEEHHHHHLHHHLLLLLLLLLLEEEEELLLLLLLLLLLLEEEEEEEEE LLLLEEEEEEEEEEL |
PRMN | - |
PiMo | - |