NONHSAT043941
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT043941 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
916 nt |
Genomic location |
chr15-:52950327..52970757 |
Exon number |
3 |
Exons |
52950327..52950994,52970203..52970319,52970627..52970757 |
Genome context |
|
Sequence |
000001 CGGGGCGGGC GGAGGGCTCG GGAGGCGCAG GGGACTGGAA GAGTTGGCTG CGCCCAGGCA CCAGGTGGAA GAATTTCCAT 000080
000081 ACCAGCCCTG CGGAGGTGCC TCTGTTTCCA GAGGCGTTTT TGTACGAAGG GCATTTTGAA AGCGAAGCAG AAGCCGTAGA 000160 000161 ATCAGCGGCG AGCCTGTTGA AAGAACCCAC AGGTGCATTT CACAGCACTC TGGGCGAAAA TTGGATGTGA AAATGAAGCC 000240 000241 AGACCGAGaa acgaggtctc actctgttgc tcagcctggt cttaaactca tgtcctcaag caatcttcct gtatcagcct 000320 000321 cctaaagtct ggaattacaa gcatgagcca ccatgcctgg ccTCCACTAT CCCTTTCTGT TTGTGGTGGT CTCCTATATT 000400 000401 TTGAGTTTGA ATGGGAAGGG AGCATGCATG TTTGATGGTT TGTTTTGTTT TTGTGAATGA AGAATGAAAA TTTATTCCCA 000480 000481 TTAAGTGCGA GCTTCAATTG AGGCACTCAG TTTATGAGGT CTTACTGATG TTTCCTCTCT TAGGTGCTGT AGTTAAAATC 000560 000561 TTGCTGGTCT AAAATGGTGA AAACTATTGA GGTATTCAAA TGATAAGTAC TTTATAAACT GAAATTGCAT TGAAAACGGA 000640 000641 GAGCTCTTGA CAGAAAGGTT GACTCTAGCA TTTATATAAG GAAAAAGACA ACTATTATCT CCCTCTACAC AGAAAGCTAT 000720 000721 ATTCAGTAGT TATAGGATTT GTACATTGTG AATCCTTAGG GATCTCTAAA CATCTGTGTC TTTAGAAGTA GTGTCACCTC 000800 000801 TAGTAAAAGA GGGCCAGTAG AATTGAGTGG TGGCAGCCTG TGATGTATAT GAATTTTGGC TGTACGTCTC TAGCGACTAT 000880 000881 TTTCTCCAAC TCTATTTAGT AAAATTCTAC CTAATT |
Predicted Small Protein
Name | NONHSAT043941_smProtein_842:898 |
Length | 19 |
Molecular weight | 2000.3179 |
Aromaticity | 0.166666666667 |
Instability index | 56.7722222222 |
Isoelectric point | 5.27252197266 |
Runs | 5 |
Runs residual | 0.0116959064327 |
Runs probability | 0.0376435258789 |
Amino acid sequence | MYMNFGCTSLATIFSNSI |
Secondary structure | LEELLLLLHHHHHHLLLL |
PRMN | - |
PiMo | - |