NONHSAT042264

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT042264

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1927 nt

Genomic location

chr15+:45803334..45848928

Exon number

6

Exons

45803334..45803403,45805896..45806161,45807971..45808090,45828283..45828407,45839278..45839365,45847671..45848928

Genome context

Sequence
000001 ACCTAAGCGA TGAAATCCAA AGGTGAATCT TTTGGTTGGT GATTTTGATG ATAGCCACAA AGCAAGCAGG CTGTATGGTA 000080
000081 GCCTTGAAAA CCAACAGGCC ACAATCACAG TGAAAACCTC AGGTTGGCAG CCACTGGAGG ATACAAAATG AGTTTGGATC 000160
000161 TCCTTCAATG CCCCATTCCC AGAGAACTGT CATTATTTGA CCTGCTGGTA GTTCCCTAAA GGACGTGCAA GGATGTTTTT 000240
000241 ATTTGACTGG ACACTTGAAG CTTGCCCTGT ATGAACAGCC CCCATCTTCC CATGCTTGTC AAAAATCAGA GGCAACTAAC 000320
000321 ACTGCGGCTT CCTGAGAGTC TCACTCTGTC ACCCAGGCTG GAGAGCAATT GCACAAACAC TTGGCTCACT GCAGCCTCAA 000400
000401 CTTCTTGTCC TCAAGTGATC CTCCCACCTT AGCCTCCTAA GTAGCTGGGA CCACAGGGAA CTCCGGATGT GACTCCTGTT 000480
000481 ACATGAAAAT GGAAGAGGTC AGAGTTGTCC AAGAGGGAGG CCAGCCACAT CCAGGCAGGG CCCCCATGGT CAGAACCCTG 000560
000561 CTAGAGCCAT CAAGGTCCCA GAGCTCCCAA GATGGTGGCA AGCCTTTTGT TCTCTGACCA GAGGTTCCTG GCCTCACGGA 000640
000641 TTCCAAGGAA TGGAACCTTG GGCCATGCGT GCACTTGATT TTGCAGATGA GTCTGGAAGT GTTAGTTGCA AAGATATGCA 000720
000721 TTTACTTCTC TGGCTACAAA AAAGAATAGA AATGCACAAA GCAGAGCAGT GTGAAGAAGA AGAGGCGATG ACCCCTAGAC 000800
000801 CGACCAAAGC CCGTGCTCCA CTGCCCAGTG CCTATGTCCC ACCACTGTCG CTGCCACCCT GCCCGAGAGA AAGGCTGAAG 000880
000881 GGGATGCTAA AGGAGATAAA ACCAAGGTTA AGTAGGAACT GCAGAGAAGA TCCACAAGGT TGTCTGCTAA ACCTGCTCCT 000960
000961 CCAAAGCCAC AGCCGAAGCC CAGAAAGGCC TCTGCAAAGA AGAGAGAGAA GGTACCTACA GAGAAGAAGG GAAAAGCTGA 001040
001041 TGCTGGCAAG GAGGGGAATA ACCCTGCAGA AAATGGAGAT GCCAAAACAG ACTAGGCACA GAAAGCTAAA GGTGCTGGAG 001120
001121 ATGCCAAGTG AAGTGTGTGC ATTTTTGATA ACTGTGTACT TCTGGTGACT GTACAGTTTG AAATACTATT TTTTAATCAA 001200
001201 GTTTTATAAA AATGCAGATT TTGTTTAGCT TTTTTTTTTT TTTTTAAGCT ATGTTAGTAC ACAGAATACT TCATTGTTGT 001280
001281 TTTGGGGAGA AGGGCCATAT GTCACTAATA GAAAGCCCCT GAAGCTGGAC TGATGTGGGG AAAACACCTT TTCCTTCTGG 001360
001361 TTTTGAGAGA CTTCCTCTTG GGTCCCAGGA AGAGGGATTC CCTGACTTTG ATACACATGG CCACCTTGGT ATAAAAGCCT 001440
001441 TGTGGTATGG AAAAACAAAT TCGTTTTTTA TGTCCTCTTC TCTGTTTCTA CCTTTCAGAA TGGACTTAAA TCCCTTAAAC 001520
001521 CCAGACATCT TCTGGGACCT GACCCCCAAT AATTGGTTAC CAGTGTGTCA GGCAATCTGG ACTTTGCCCT CAAAAGAGCA 001600
001601 GTGGTTCCTG TTTCTAGGTT GTGGATCTTC AGATAAATTC TGTCATTTTC CTTTCACTTC CTGAAAGCCA GGGTCGGTTC 001680
001681 ATGAAAAGCT ATGAAACAGC ATGCTAAATG TGAAATGTCA ACCCTCACTA AACTTTGCCG GTTCAGAGCA TCAGATGAAG 001760
001761 ACTTCATTGG GTTTTACAGT GGCTTTCTGA TTTTTGGTAG TCCATTGAAG AAGGGAGTTT GAAAGTTGTT GTATACTGTT 001840
001841 AACGATTGTC TGCCCATGTC CTGCCCAAAA TACCATGATT CTTTATGGAA ATTATCTTTA ATAAAGCTGG ATACAGTTTG 001920
001921 GCTTGGG
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Predicted Small Protein

Name NONHSAT042264_smProtein_1469:1663
Length 65
Molecular weight 7485.5723
Aromaticity 0.1875
Instability index 49.671875
Isoelectric point 4.74859619141
Runs 12
Runs residual 0.03890625
Runs probability 0.0495716304541
Amino acid sequence MSSSLFLPFRMDLNPLNPDIFWDLTPNNWLPVCQAIWTLPSKEQWFLFLGCGSSDKFCHF
PFTS
Secondary structure LLLLEELLEELLLLLLLLLLLLLLLLLLLLHHHHHEEELLLLLEEEEEELLLLLLLEEEL
LLLL
PRMN -
PiMo -