NONHSAT041977
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT041977 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1823 nt |
Genomic location |
chr15+:42184987..42188134 |
Exon number |
3 |
Exons |
42184987..42185019,42185134..42186566,42187778..42188134 |
Genome context |
|
Sequence |
000001 CTCTGTTCTG CCCAGTGGCC TGGCGCAGGA AAGGAAGTGC ACACGCAGGC GGCCCCGGCT CGGGGGTGGC AGGGCCTCCC 000080
000081 CTGAGATGAG CTCCAGCAGC CGCAGGAGGT GGATGCCGTC AGCCAGCTCT GTGTACAGGT TCCGGATCTT GATGCCCGCC 000160 000161 TGGGGAGGGG ACAGGGGTAA GTATGGGGTC AGCCCAGCCT CACCTGTCCT CCCATCCTGG GACCTGAGAG GTACGACCCA 000240 000241 GAGCAGCTGC TTTGGAAGAA GGAGCTCTGG CCTCAGCTTG GCCTCAGGCA GATGACCCCA CAGCTCACCC CGGAGGCCCA 000320 000321 CTGGCCAGAG CTGGGGGCCT GGTATGGGTG GGCTGTGGGT CACAGCTGGC TATACTCACC TGGCCGCACT GGAAGACGTT 000400 000401 ATTGATCCAC TTGGTGAAAG TCTTCTCCTG CATCTGCATG TGCCGGGCCT GTAGCTTGCG AATGTGGCCC GTCTCGTACT 000480 000481 GAGAGTCCAT GGTGAGACTT GGACTGGGCG GGACCCGGAG TTCTGTGCTG GGCCTCCTGC TGCGGTGCCC TGCAGCCCCG 000560 000561 AGGAGCTCCC GGGGACTGTG GGGCTGACCA GCCATCAGCC CTGCAGACTT TGGGGATGAG GAGCTGCTGG ATGGCTCCCT 000640 000641 AAACCTGGAG GGCATGCAGA TTAGGGGATG ATGTGAATGG AGATGGCCCC TCTACCAGGG GCCTGGGGTC CCGCCTTGCC 000720 000721 AGACTGTCCT CACATTTCAT GGGGGTTGCA GCTTGGAGCC CAGCCAGGTA AGGGCCAGTG CTTCTGGTCC CCTGTGCTTG 000800 000801 AATGGCCCAG GGCCCCCTTT GCCCCACCCC ACCTTCCAGA TTCTTCTTCT CAGAGCCCCT GCTGCCAGGT CCCTCCACCA 000880 000881 CAGTGACTGG GACAGGTGGA AGGAAGACAG GAAACTGCTT ACCTTGGTGA TGCCTGGGTC CCACAGAGAC GGCTCTGCTG 000960 000961 GACGGATGGA GATGGTAGAT AGCAGGGGCT GCTTACCTTG GTGATGCCTG GGTTCCACAG AGGCGGCCCA GCTGGACGGA 001040 001041 TGGAGATGGC AGATAGCAGG GGCTGTGGAG GGAGGGAGAG GGACATCAGG AGAGGCCAAG GCTGGAGCAG GGCTGCACCA 001120 001121 CAGCCCTCCC CTTGAGCCAG CGTGCTGGGG TGACGGCACA CAGGCGGCAT TGTCCTCCCA CCTGCCACAG GGCGTGGCCC 001200 001201 AGACAGGGAG GGGGTGGTTC AGGAATGCTC CAGGGCCATT GCCAGATGAT GTCCTCCTTC ATCATCCTCC CTTCCCCGCC 001280 001281 AGCAACTTCT CCAACTCCAG GTGGGGGTCC TGGCTCCCAG GACGCAGAGG CCCATGGAGC GGCCCTGCCA CCGCATGGGG 001360 001361 TGCTGCAGTC TGCGTAGGAG GTACCAAAGG GCAGAGCCTC TGTGGGAAGC CTGTGGACGC ACTTCCCAAT CTGAGACTGC 001440 001441 CCTCTGTACC CTCTTGGGGC CTCTCTTAAG ACCCTCAGCC CATGGAGTCC TGTGTGATGT TGTGAGCGTG GGAGGACAGA 001520 001521 CTGAACTGCT CGGCCCGTGG AGTCCTGTGT GATGTTGTGA GCGGGGAGGA CAGACTGAAC TGCGTGGTGC TTCGCACATA 001600 001601 GACCTCAACA GGGATTGGCA TTTTGAAGCT GTTGGCGGGG GCTGTGGACT GCTTTTCTTC CTTTCTAGCT CAACGGCAGC 001680 001681 TAAAGCCACT GCATACAATG CAAGGACTGG CTCCTGTTTG GCCACGACTG ATTGCAGCCC CTGGTGAAAT GAGAACCCTG 001760 001761 TGGGTCGGAA CAAAGTTTGG ATTATTTATG TTGCAAGTAA CTAAAATCTC AAGTGAAACT GGT |
Predicted Small Protein
Name | NONHSAT041977_smProtein_488:586 |
Length | 33 |
Molecular weight | 3337.9649 |
Aromaticity | 0.03125 |
Instability index | 79.634375 |
Isoelectric point | 12.1763305664 |
Runs | 5 |
Runs residual | 0.0353954081633 |
Runs probability | 0.0499911676382 |
Amino acid sequence | MVRLGLGGTRSSVLGLLLRCPAAPRSSRGLWG |
Secondary structure | LEELLLLLLHHHHHHHHHLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |