NONHSAT041544
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT041544 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
857 nt |
Genomic location |
chr15-:33528677..33539756 |
Exon number |
9 |
Exons |
33528677..33528832,33529124..33529199,33533735..33533799,33534804..33534961,33536438..33536506,33537164..33537214,33537956..33538105,33538770..33538814,33539670..33539756 |
Genome context |
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Sequence |
000001 AGTAAGGCAT TGCCCTTTCT GATAGTTCTG ACGTTCAGTT GGAAATCTCT GTTGGGATCA GAAGAAATCT CAACTGGGAA 000080
000081 GAGAAGGGGA CGCTATGATG GAAGACGTTG GACAGAATCC ACTGGATGAT GTGTAGCAGA CGATATAATT ACCAGCATTA 000160 000161 GAAGCTGTAA AACAGAACCT TGACTGCCTG AATTCAGACC TTGAAAAGGA CCTGCAGAAA CTGGATATGG AGAATCAGGT 000240 000241 TCTCCTTAGA AAGATTAAAG AGAAAGAAGA AACTATTTCA AGGAGAAAAG TAACGCAATC CTAAGCAGGA ATGTGGTGGA 000320 000321 GGTTCAGAAA AAGATTTCAG GGTTATTTAC AAATATTGGC CTTGAAGAAG AAACCACAAA GCAGATCCTG GAGGAAATGA 000400 000401 AGGCAAGACT ACAGAAGTCA ACAGAGTCCT GTGCAAAGCA AGAGGAGGAA CTGGCCAAGG CAGAGGCAAT GTCTCTTCCA 000480 000481 CTGAGGGTCT GCCCGGGATA GAATGGGAGA GAATCCCAAG GGTCTTAGAA ACAGATCTGC TTGAGGCATA GGAGGGGGAG 000560 000561 AAATACCAGG AAGTTCTGAG GAAGATGAAA GAGGAAAAGG AGACGCTGCT TCTTGAAAAA CAAATATCCA AAGCCCAGGA 000640 000641 TGACTCCTCT CAAACAGTGA AACCGGGATC AATTTTGGCA GACACCACCC AAAGAAACAT GGAGAGGACC ACCATTAAGA 000720 000721 AACAGGAGAG AAGGTGTTGG TACAAGTAAG CGGAAGAATC TTGCTTTTAC CTAGCCTAGA CCACATTTCA CTCTACACAT 000800 000801 TACCTGATAA GGGCCAAAAG AACAAGAATA AACACATCAT CCACTGATCA GAATACA |
Predicted Small Protein
Name | NONHSAT041544_smProtein_584:748 |
Length | 55 |
Molecular weight | 6400.2384 |
Aromaticity | 0.037037037037 |
Instability index | 54.0314814815 |
Isoelectric point | 9.24993896484 |
Runs | 10 |
Runs residual | 0.0224932249322 |
Runs probability | 0.0453365129837 |
Amino acid sequence | MKEEKETLLLEKQISKAQDDSSQTVKPGSILADTTQRNMERTTIKKQERRCWYK |
Secondary structure | LLLHHHHHHHHHHHHHHLLLLLLLLLLLEEEELLLHHHHHHEEHHHHHEEEEEL |
PRMN | - |
PiMo | - |