NONHSAT041027

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT041027

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

8993 nt

Genomic location

chr15+:25326238..25359068

Exon number

16

Exons

25326238..25326371,25327736..25327852,25328543..25328674,25330337..25330469,25332614..25332746,25334761..25335013,25336737..25336866,25338981..25339121,25342468..25342586,25343864..25343975,25344292..25344425,25349006..25351441,25352619..25352735,25353057..25353185,25354145..25354550,25354702..25359068

Genome context

Sequence
000001 GTAGTGTTGG TGTAAAAGGC AAACCCGTGT CATGAGGGAT GGTCATCATC TTGTGTGATC CTTGGAGATG GCAGGAAGCC 000080
000081 CTGGACATAC ATGGTGTGGG GGCTCCTCCA GAGGCTGTTG GGATCCTCCT GGATGTGGTG TGGGCATGGA AGGAAGGCCA 000160
000161 GTGGAGACAA TGGATGATCT TGTTCTTAGC AGATCACTGG ATGTGGCAGG GAGTCCTAGG ACATGTGTGG TGTGGGCTTC 000240
000241 TTCAGGTGCT GGTGGTGTTG GCATGAGGAA AGGAGGTATC TTCGAGGGAC AATCTTCTTC TTGTGCGATC CTTGGAGATG 000320
000321 CCATGAGGCC CCTGGACACA TGTGGTGTGG GCTCCTTTGG AGGCTGTTGT ATCCCTTCTG AATGTGGCGT GGGCATAGAA 000400
000401 GGAAGGCCAG TGGCCACGAG GGACAATCTT GGTCTTGGGA GATCCTGGAA ATGATAGGGA GTCCCTTGAT ATGTGTGGCA 000480
000481 TGGGCTCCTT CAGGTGCTAG TGGATTCCTT AGGATGGTGG TGTTGGCATG AAAGGCAGGC TTGTATCATG AGGAATGATT 000560
000561 GTCATCTTGT CTGATTCTTG GAGATGGCAG GAAGCCCCTG GAAACACATG GTGTGGACTC TTTCACAGGC TGTTGAAACC 000640
000641 CTCCTGAATG TGAGGCCAGA GACAGGCAGA CAGCAGATGT ATTGCAGGGA GCTGGATGAC ATGGCCCTTG GAACCTGTGC 000720
000721 ACATGCCTGC CTTTCTGATG CACGTCCATG TTTTCTCTGC ACCTCCCCGG TGGTGTTGGT ATAAAAAGCA GGCTTACATC 000800
000801 AGCAAGGGAT GATTGTCGTC TCATGCGATC CTGGGAGATG GCAGAAGTCC CGGGACACAT GGAGTGTGGG CTCTTTCGGA 000880
000881 GGCTGTTGGA TCCCTCCTGA ATGTGTTGTG GCCATGGAAG TAAGGCCAGT GGCTACGAGG GACAGTCTTC ATCTTGGGAG 000960
000961 ATCCCTAGAG AGGGCAGGGA GCCCCTTGAC ATGTGGAATG TGATCTCTGT TGGGTGCTGG TGGATCCCAC AGGTGGTCTG 001040
001041 GCATGGAAGA AGGCCAGAGG CTGCGATGGA TCATCTTTGT CTTGGGAGAT TCCTGGAGAT GGTGGGGAGC CCCTGGGCAC 001120
001121 GTGCAGCATA TGTGGCGTGG GCTTCTTCAG GTGCTGGTGG ATCCCTCAGG ATGTTCATTG TGGAACCAGC ACAGATTTTC 001200
001201 ATACGAAAGT TATTTCTTTT TAACCTCAAA AAGTGACAGA ATGGAGTGTA TCATGAAAAA GTCTGACATC AAAACCTCAA 001280
001281 AATGTGATAT TGATTGGGTG AGATAGAATT CCATGGAATT TCATTGCCAA ACCAGTGAAG TGCTAATTTT GACATTTGTA 001360
001361 CCAGCTAACG TAGCTGTGAA GAAACACACC AATACACTTC TAAGGACAGC ATAGACCAAG ATCTAGGTTT CATATGGATG 001440
001441 AATTTATTCT TCCCTTTGAG GCAAGACAAG AAGGAAAGAA AGTATTGGGA ATAATGCTGC CCTCCCATCC TCAAGGGCCA 001520
001521 GTGGGAACTC TAATATTGAT TGGTTTTCAC AGAATTCCAT GGACTTTAAC TGCTGAACCA ATGATGCACT GATTTTGTCA 001600
001601 CTTGTACCAG CTAACGCATC TGGGAGGCAA CAAAACAATA CTCTCCTGAG GTAACATCGA ATTTTTAGTA AATTCATTTT 001680
001681 TGTGTGTTGT TTTTATTATT TTTTTAAGTA ATTGAGAATT TCATTAGGTG TGCAAGGAGT CACTTAATAC AAATAGTATT 001760
001761 AGGCATTCAA TACTCTCATG AGATATCTGA GCCTTCAGTT TCTTTTATTT TAACATTTTA CATTTTTCTC AACTTTAACA 001840
001841 TCAGAAACAT CCTATAAGTG TAATAAAATT CTTATACTTT ACATATAGTT ACATAGTAAA TCCTCCTGTC TTATTTAAGT 001920
001921 TTGAAAAATG AACATGTATA CTTCTCATTC CCATGTATAT AATCTCTTCC CACAGAATGA GGTGGACCAA GAAACTGGGC 002000
002001 TTCATACGGA TGAATTTATT TTTTTCCCTG TGTGGAGACA TAAAGGAAAA GTATAGTGAA TAATTCCGCC TCCCACCCAC 002080
002081 AAGTCCCCAT GGGAATTCTC ACATGTTAAA AAGCATTTTG TCCTGAAAAT AACAACAATT TTTCTTAGGG AATCAGGACA 002160
002161 CTCCAATGAC AGTGAGACTC TGGCTATGCC AGGCAGCCAT GGGCTGGTCA TTGTGCTGCT GGTCTCCATG ATTGAATAGT 002240
002241 GTGGGTCATT GGTGACAGAT AGCTATGTGC TCAGTGTCTG CCACATATCT CAGGTTCAAA GTCCCTTTTA TAAATGTGCC 002320
002321 TGGATGGATG ACGACTTAAA AATGAATCTC GTTGGAATCT GAGCAAAACG AGTGAGCAAA CCACTTCTGT GCAGTTCTGT 002400
002401 GAACTGAGGT CAAGCACAGG GACCATGCCA GGCAAACACG TGCAGAGAGT TCAGTTTGGT CAGCAACTGG TACCAAAATG 002480
002481 GCCTGTGGTA TTGGAAAACA AACCCACTCA CATAGCTTAC AGCACATGAA TTGTACAGAG GTCTGTATGT GTTTGTATAT 002560
002561 ATTTATATAT GTTTGTGTAC ATATATCTTT GGGGATTATA TGGCATTTCT TTCAGTGTTT GGCTGGCAGT GTCCATACTC 002640
002641 TCATAGTAAA CAGAATTACA CAAGAGTAGA GGGAACAGTA GGAAATGGTT TTGCCTACCC TAGAGTCTTT TATACATGTT 002720
002721 TTTAGGTGCT ATAATCTTGT GTGTGAGGTC AGTCTCTCAG GTTCATTAGA TGGACAGTGT AAAAGGTATT ATGAGGTTTT 002800
002801 ACATATTATT TATCTATTAA GTAAAAGAAA TATATGGAAA TTGAAGAGTA GCTTTTATCT ATTAAAGAAA AGAATGTATG 002880
002881 GAAATTGAAG GGTACTTTCT ATTTGTGGAA AGTCTTAACA TTTTAATTTC CTTATTGATC TTGTCACAGA AGTTGGAATT 002960
002961 TAAGTTTTGC CTGTCACTCA AAGAGAAGCT TTTTAGACAT TTGATTAAGG GATTCTAGTA GATGCTATAG TAAACATTTC 003040
003041 TAATTGTAAA ATGATTAAAT TTGCAATTCA TAGAGTTTTA TGTGGATTTC ATTGCCTGAT ATTCATTATT TTTATTAGTG 003120
003121 GGTTTCATAG ATGTTTAAAG GGAGATCCTA GTTTTATTGT GTGATACTAA GGGAGGCCTT TTGGTCTTAG AAAACTGACT 003200
003201 TTCAGTACTA CCCATTTCCA GGGAGTGAGC ATAATTTTTA TTCTCATACC ACATGGGCAA GTGAATATCT ATGGTTTATT 003280
003281 TCTTATAACT CGTCATTAGT AATTATGAAA GTAAGAAAGT TGACAAATGA AACTCTTTTA ATTATGAGGG TTTCATTTGT 003360
003361 CGACTTCCTA CTTCCTCAGT GTGCTTTGTG TATTGGAGGT AATACTGGAA TTGCATGGAA TTCCTACTGC TGCTCCAGTA 003440
003441 ACCTGCTGAT TTTGTCACGT GTACCAGATT CGTTGTCTGG CAATGAGAAC AATACACTTC AGAGGTAATA TTGCAATTTT 003520
003521 TAGTAAGTGC ATTTTTCCTG GGTTCGTTCT ATTATTTTAT TTTAGCAAGT AAGATTATAA TTGGTTTTTC AAGCAGTCTG 003600
003601 TTAATCCAAA TGGTGTGAGG CCCTAATAAT CTGGTTAGTC ATCTGAAGTT TCTGTGTTCT TTGTACAGTA TTTTTATACT 003680
003681 TCCTCTGTTT TCAAATAACA TTAGGATACC CTACTAGCAA AATAATTTAG TATATTTTAT ATACTTGTGC ATAGTAAGCC 003760
003761 TGTTGTATAT GTACACTATT TGCATGGTTG GCAAATTACA TTTGCACTTT TTATTTTTCT ATAATTTTTT CCTATTTTCA 003840
003841 AAGGTTAATG TGGACCAAAA ACTAGATTTC ATATAAAAGA GTTTATTCCT TCTACTTGAG GTGTGACATG AAGGAAAGTA 003920
003921 ATGGAAATAA TTCTGCCCTC CCATTCTCAA GGGCCAGGGG GAATTCAAAT ATTGAACGGA AGTGATTTTG GAATTGCATG 004000
004001 GAATTCTCAC TGCCATCCCA AAGAAATGCT GATCTTGTCA CTCTTACCTG TTTCATTCCC TGGGGGCAGA ACAAAAGGAC 004080
004081 GCACTCCAAA GATCGGCATG AACCAAGAAC TGGGTTTCAT ATAAAATATT TTATTCTGTC CTCTTGAGAT GTGACATGAG 004160
004161 AAAAGTATTG AGAATACTTC TATCACCTCA TCTTCAAGAA TCCGTAGGAA TTCTCCCATG GTGGACTTTA CGGTTAACCT 004240
004241 GAACAGGTCT TGGAAAAAGG ACTTTAAACA TTCTCCTGTT CTGTGGAATA AGTATACTTT TTTCTGGACA TACACCTTGT 004320
004321 CAGTGAGTAT GTATCATAAT TCCTCATAAC TTCTTATCAG GAAACATTCG ATGTAGAAGA TTTCTTTCTC AACTTCTCTA 004400
004401 ATTGCCCCTG TGGTTTGCAG GTTCCATGTG ATACTAGAGT TGCATAGATT TTTAACCTTT ACGCCAATGA AGATCTGAGG 004480
004481 CAAACATTGC CCCTTTTTTA GAAGTTTGCA TTTGTCACTG ATAACTGTAA TAATTGATCT TGTTGAAAAG CCTGGGAAAT 004560
004561 GAAGATCTGA TATGTCACTT TTACCGGCTT CCTCAACTGA AAAAGAATAC AATGAAACAC GCTGAGAATT TTTGTGCTTT 004640
004641 CTCAGTCTTG CTGATGATCT TTCTATGGGC CTGAAGCGTG GAGAGTGCCA GAGAGGCTGA TCCTCAGCAG TGTGGCAGAG 004720
004721 GAAAGTTGGG TGCGACTAAG GGGTATGCGG TGCCCACATG CCACTGGGTC CTCAGCAGTA CCACCTGGTG AGCGTCACTC 004800
004801 TTGAGAGCTG AGAGTAGGTG GGAAGCAGCT CATGGTGAGA GGGTTCAGAG GCCGCCTTTC CCTCTCTGCG CACTGCCCAG 004880
004881 TTCTTCTAGT CACATGTCCC GGGACAGTAC CATACCTGTG TGTGTCCTGC CTGCATTGCT GTGACCACTT TTAGTGGAAT 004960
004961 CAGGTGCAGT GCAGCTCTGC AGCTTCTGCA AATTGCCACG CTCCCACTCT CAAGCAGGTT GAGTGCTACG AGTGATTTTT 005040
005041 AGACCATTTG TTTATTCCCT TATCATGGCT TTTTGTGACT TCTTCCTCCC CAGTCCGTTG GGTCACCTTT AAAGGTAAAG 005120
005121 TAATCCTGAG GTGGTTGAAT TTACGGAAAT GCTATGCATT ATTGTGAATG GGATGTTCAC CGGGCCAACA TCTTCTTGGA 005200
005201 ACTTTGAGCA AACTGATAGT CTGGTTGCAC ATTTGATTTG TCTGGCAGTA AATGTTGGAC AGTATTTGGA CTGATGGAAG 005280
005281 CTAGAGACAA ACACATTGAC TATTGTTGAA TAACACTGGA AACATCTTAG GAGAGCAGTA CATTAGCTAA TTTAATAGGT 005360
005361 ACATAAACTG AATCCCACTG TCTTGTGCTT GACGGACCAG CAGACACATA TGCTTGTATC GTTCTCATGT TTCTACATGT 005440
005441 TTACCCTATT CCCACAGGTC AACAAAGACA AGGCACCTAG CCCCACATGA AACTTTATTC CTTTCCCTTT TGAGATGTGA 005520
005521 CATGAAAGAA AATAACAGAA ATGATTTTTC CATCCCATCC TCAGGGACCA GTGGGAATGA ATTTTACCAT CCCACCCTCA 005600
005601 AGGGCCAGGT CAGGTCGCTA AGCATTTTGT CACTAAAATA TTGCCCTTTT TTAGGGATTA TGTAATACTC TATAAGGCAC 005680
005681 TGTCTGTGCT GGGCAGCATG GAGCCTGGGT CATTGCTGTG TTGGGGGCTT GGTCTCCATG ACTTAATAGG GTGTATCAGT 005760
005761 GTGTCCCAGA GAAGTGTACT CCAGAGTGCT CATTTTCTTT CATGTTTCTG AAGCAAACAG TGCCCCCTTT TTTAGAAGTT 005840
005841 TGCATGTGTC ACTGATAACT TTAATAATTG ATCTTGTTGA AAAACCTGGG AAAACAGTGA GTTAAATAAT AACTTCTCTG 005920
005921 AACATGAGGT CCAGCCCAAT TACCTGCCCT AAGCAAACTA TATGGAAGGA GAGTTCAGTT TGTTCAGCTA TGTGGTCCCA 006000
006001 GCAAGGACTG TGGTACTGGA AAACTAACCA GCTTACATGC ACTAGAGAAG TAGAATTGGA CAGTGATCTG TAGGTACCCA 006080
006081 GTTTGGAGAT GAAATTGCAA CTCTGAGTTC TTGATTGGCA ACATAAATAC GTTGATAGTA AACAGACCCT GGGGAATCAG 006160
006161 CACTTGAGTT GTGAAAAGCG GGAAATAGCT ATGCCTACAC TAGAGCCATT CACACTTTTG CTGGAGCTGC AATAATCTTC 006240
006241 TAAGTCATGC TTGCTCTCGT GAGGGCAATG AGATGGTCAC AATCCAAGGA GAGTTGGGGT TTTCACTTTT CATTTCTCTA 006320
006321 TTAAGTGAAA AAAGTATATG AAAATTGAAA AATAGATATT ACTTATGTAA TCTTCACAGT ATAATTTGCT TGCCAAGCAG 006400
006401 TCACTGGGAT TTAATCAGTT TCTTTGTCTT TCGTTTTTCT CATAAGCTGA GAGAGTAATT TTGTGTGCAC AGAAGTACTG 006480
006481 TCTTCAGCTA CATGCTGCAT TAAACATTCC TAGATGTGAA ATGATTAAAT TTCCAAGTTT TTAAAATGTG GATTTTTCTG 006560
006561 GCCACTTTTA TATCTCTTCA ATGGGTTTCT AATGGATTTA AGGAGAGAGC CTAGTCATGA TGAATGGTGT TGTGTTGGGT 006640
006641 ATGCTGAGGA AACTTTGAGA CCAATGTTTC AGAAAAAATT ATTTCTATAC TGTCATGTTT CAAGTACCGA GTATTGTTCT 006720
006721 TGTCATACAG ATGGTCCAGT GAACATCTCT GGTGAATTCC TTACAACCAA CCTCTTGTTA CTAAATATTC CATTAGGAAT 006800
006801 GTTTTGTTTC TCAACTCCCT GATTTCCCCT TTATAGATTG GAAGTGATAT TGGTGGAAGA CAACATTTTG CCGCTTGGAA 006880
006881 TTCTCACCTC CACACCAAAG AAGTACTGTT TTTGTCATTT GCACCAGCTT CTTTCTCCAG GAAAGATCAA AACGATGCAC 006960
006961 TGCAAGGTTA ACATCCAATT TTTAATACAT GTAATTCCCT GGATTATTTT TGTTGTGTTA TTAAATAACT TAGAATTTTT 007040
007041 TTTACAAAGT CTGTTGAACC AAACACTGTA AGGCATTAAT AACCTGGTGA GTTATTTGAG GCCTTTTTTC CTCTCCTAGA 007120
007121 ATTTTTGCAC AATTTATATT TTGAATAATA TCAGAGACAT CCTAGTAGAG TAATGAATTA GTACATTTTA TATGCAGATA 007200
007201 CATAGTGAAG CCTCCTTTCT TATGCATATT TGACAAATGG ACATGTATAT TTCTCATCTT CCCATATTTT TACTCCATTT 007280
007281 CCACAGGTCA TGTAGACCAA AATGTGAATG TCATATGAAA GAGTTTAAAC ATTGCCCTTG AAATATGACA GAAAGTATCA 007360
007361 GAAATAATTA TACCATTCCA TGCTCACAGG CCAGTGGGAA TTCTCACAGT AAGCATTTTG TCCAGAGAAT ATTCTTCTTA 007440
007441 GGGAACTATA ACATTCCAAT GATAATGGTA GTCAGCCATG TGGCTGGATC ATCGTTCCTG TATCCTGGTC TCTATGACTT 007520
007521 AGTGTGGTGA TGGTGTCATT GTGTCCAAGT GTGACAGAAT TGTTAGTGTG TAGTGTCTGT CTCCTATCTC AGGCTCACAG 007600
007601 TCCCTTTTAT AAACATGCCT GGATTGATGA TGGCTTCAGT ATCTTTTGGA AATCTGGACT GAGCAATAGA ATTGCTTCTC 007680
007681 TCAAATTGAT TTCAAGTCAT ATAAAAGGCC ATGTTACACA TATATTGTTA ATCTGAGGGA GGCTGTGATC ATTTAAGTTG 007760
007761 TATTTTATAA ACACTAGGAC CACCAGTAAG AAAACAATTC AAAAAATATT AAAAGAACAA CCAAAGAATT AAAATAGAAT 007840
007841 AACCGAAAAG ATCTGTTTAA CACAAAAGAA GGCAGTTAAA GATGAACAGA GGAACCAATA AGACATATAG AAAACAGATA 007920
007921 GGAAAATGAC AGACATAAAC CCAGCCATAT GACAATTATA TTAAATTTTT AAGAGATTAG GAAATTCCGT TGTTTTTTAA 008000
008001 ACATGAGCAA CTATACGCTG TCTACAGAAG AGACACTTTA GAACAAAAGA TACAAATAGT TGGAAAGTAA AAAGATGGAA 008080
008081 AAAGCTATAT CCAGCGAATC CAGAAGAGAG CAGAAGTGGC TATTCTGACA TCAGAAAAAA GAGACTTTAA GATAAAGTAT 008160
008161 TGCTAGAGAG GAAGAAGGAT AGTATTTAAT GATAGAAGGG TTAATATGGA ATATGTAACA ATTACAATCA TATCAGCACT 008240
008241 AACAACAGTG CCCAAAACTA CATACACTGA AATTTAACAT GATTGAGGGG ATCAATAGGC AATTCAACAA TAAAAGCTTT 008320
008321 TGTTCATACC CTCTTCTTAA TCAGTGATAA GTCAATTAGA TAGAGCATCA TTGAGGTTAC AACATACTTC AGCAATGTTG 008400
008401 TCAACCAATT TGACCTGAGA TAGATAGATA GACAGTTAGA CAGACAGACA GACAGACAGA GAAAACTTCA CCCAACAACA 008480
008481 GAAATACAAA TTATTTTCAA GCATACCTGG AACATTCTCC AGGATAGAGT ATATGTTAGG CTATAAAACT GTACTCAATA 008560
008561 AATTTAAGAT TGAAACCATG TAGAGTATGT TGTGTGACCA TAGAGGAATT AGAAATCAAC ACAGAAATAA ATTTGGAGGT 008640
008641 CACAAGATAT TTGGAAATTA ACACACTTTA CAGAGCCCAT TGGTCAAAAA TATATATATT AAACTAGAAA GGCCGGGGGT 008720
008721 GGTTGCTTAC ACCTGTAATT CCAGCACTTT GGGAGGCGTA GGTGGGCACA TCACTTGAGG CCAGGAGTTC AAGACCAACC 008800
008801 TGGGCAACAT GGCAAAACCC CATCTCTACA AAAAAATACA AAAAATGAGT TGAGCATGGT GGTGCATGCC TGTAGTCCCA 008880
008881 GCTACTCAGG AGGCTGAGGT AGGGGAATCA CCTGAGCCCA GCAGGTAGAA GCTGCATTGA ACCAAGATTG CACCACTGCA 008960
008961 TACCAGCCTG GGCGACAAAG TGAGACCCTG TCT
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Predicted Small Protein

Name NONHSAT041027_smProtein_38:265
Length 76
Molecular weight 8700.2549
Aromaticity 0.133333333333
Instability index 41.852
Isoelectric point 4.92938232422
Runs 10
Runs residual 0.0156028368794
Runs probability 0.0185037979156
Amino acid sequence MVIILCDPWRWQEALDIHGVGAPPEAVGILLDVVWAWKEGQWRQWMILFLADHWMWQGVL
GHVWCGLLQVLVVLA
Secondary structure LEEEELLLLHHHHHHHHLLLLLLHHHHHHHHHHHHHHHHLLHHHHHHHHHHHHHHHHHHH
HHHHHHHHHHEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHH
HHHHHHHHHHHHHLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTT
TTTTTTTTTTTTToo