NONHSAT040695
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT040695 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
866 nt |
Genomic location |
chr15-:21941272..21942808 |
Exon number |
2 |
Exons |
21941272..21942108,21942780..21942808 |
Genome context |
|
Sequence |
000001 ccttggcctc ccaagtggtg aaataacagt ctgtctattg gaatcagaat cctgacaagg tccaCCCTGC ACACCACTTT 000080
000081 CTCACAAAGG TCCTCTCATC CTGAGCAGTC CTCCCTGCCA CTGATTTGTT GTCCTTCATA ATGTCCCACA ATCTGCACCT 000160 000161 GTCTTTGTTC TCCCTCATGA TACTGCTTCA CTTCTATGCC CTGAATTTCC TATAATGGGG AAGGAGCTCT AAAGCCTGGT 000240 000241 TGTAGGAACA CTTCATGAAC AGTACTGTGC ATGGCACACA ATCTCTAGCC ATCCCACTTG TCACGCTAAA ATCGATGACT 000320 000321 CGCTTCTGGT AGTGTCAGCC TGACTCTTTG GACATGCTGA GTAAGCAGAG CGAGAAAGGA AGAGGGCTTC GACCAGAGGA 000400 000401 AGAGGAGCAG AGAAAACAGG GAAGGAGAAT TCAGGGAAGT GGGGAAAATC GAGGGAGCAG CAGCGTGGGG ACTGAAGAAA 000480 000481 GAAGGGTCAG GTGTCGCTGG GCAGCCAAGA AGAGACAAAC AGGTCAGATG GTTTTCACAA CTGATGGCTG ATAACTTGTA 000560 000561 TGAGAGCAGC TTTAATGGAG TGATTAAGGT GTAAGTCAGA TTGCCCTGTG ATGGAGGTGT GAATAGGGGT GGGAAGTGGA 000640 000641 GGGCAAGGAA TATCAATAAC AATTTCAGGA ATTTGGCTGT AAGACAAGGG AAAAAGATGG GAGACGTGAG CATAGGAAGA 000720 000721 GGGATGTTGA AAAAAGAGGT TGTGTTTATT CTGTGGCTCT TTTGATGGGA GACACATTCA TGCTGGGAGG TTGAATATTT 000800 000801 AGGAACCATA AGGAACTATT ACTAACAAAG AAAGTTCCAA AAACATTCCT GGTTGGAAGG TTTCAC |
Predicted Small Protein
Name | NONHSAT040695_smProtein_353:550 |
Length | 66 |
Molecular weight | 7423.1932 |
Aromaticity | 0.0307692307692 |
Instability index | 90.4630769231 |
Isoelectric point | 10.8167114258 |
Runs | 10 |
Runs residual | 0.00355769230769 |
Runs probability | 0.0457251369017 |
Amino acid sequence | MLSKQSEKGRGLRPEEEEQRKQGRRIQGSGENRGSSSVGTEERRVRCRWAAKKRQTGQMV FTTDG |
Secondary structure | LLLLLLLLLLLLLLLHHHHHHLLLEEELLLLLLLLLLLLLLEEEEEEHHHHHHLLLLLEE EEELL |
PRMN | - |
PiMo | - |