NONHSAT039656
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT039656 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1547 nt |
Genomic location |
chr14+:100606630..100610572 |
Exon number |
3 |
Exons |
100606630..100607583,100608073..100608130,100610038..100610572 |
Genome context |
|
Sequence |
000001 agtaGTCCAC GAGAACTACC TTGAAAGAGC AAAACCAgcc aggtgcaggg gctcacgccc ataatcccag cactctggga 000080
000081 ggcccaggtg ggtggatctc gtgaggtcag gagttcaaga ccagcttggc caacatggtg aaaccccatc tctgctgaaa 000160 000161 atacaaaagt tagctgaaaa tacaaaagtg gcacatgcct gtaatgccag ctactgggga ggctgaggta ggagaattgc 000240 000241 ttgaacctgg gaggcagagg ttgcagtgag ccaagattgc gccattgcac tccaatctgg ggaacaagag caaaactctg 000320 000321 tctgaaaaaa aaaaaGCGAC ACCACATGGG AGGATGTTTC TTGGGGGAGG TGTGCTATGC CCGAGCAGGC TCCAGCACCA 000400 000401 GGGGCGCTGG TGTGTCAGGA GCGCGCCTCC AGGCCGGTGT GAACTCTGCA ACTTCACATT GTGCCTCCTG CCGCCGCTGC 000480 000481 TGCTTCCCCG AGCCCCAAGC TCAACCTGGA GCATGAGCTC CCACCCTGAG GAGGAGGCTG TCAATACTGT GTTTCTTTCC 000560 000561 AGGGAGGCAA CGGGTGGGTG CGATGTTGTC ACTTAAGTTG CCACCTCTGC ATAAGAGCTC TCTGATCAGA AAGCAGTTTC 000640 000641 TTTGTTGACC CCAGCCAGCC TTGGCTCTCG GGTTGGGAAA TACAGTCACG GTATCCATGG AGACCTCTTG AGGTGGAGAC 000720 000721 GGGCGTTAAA TCCTTCTCAG GCAGTCTGAG GTGGCCAGAG TCTGAAGCAA GCAGCCTCTA TGGAGCGAGG GGAGCAGGTG 000800 000801 GGCCCAGCCT GAGCGGGGCC TCTGCACAGC CAGCTTTCCC CCACACCTGT CTCCAGCCAG GGCACCCACA GGCCCTTTCT 000880 000881 CTCCCAGGAT GAAGCCTGCT GGGAGCGTGA ATGACATGGC CCTGGATGCC TTCGACTTGG ACCGGATGAA GCAGGAGATC 000960 000961 CTAGAGGAGG TGGTGAGAGA GCTCCACAAG GTGAAGGAGG AGATCATCGA CGCCATCAGG CAGGAGCTGA GTGGGATCAG 001040 001041 CACCACGTAA GGGGCCGGCC TCGCTGCGCT GATTCGTCGA GCCCATCCGG CGACAGAGGA CAGCCAGAAG CCCAGCCAGC 001120 001121 CCCAGACTCC AGTGCACCAG AGCACGCACA GGAGCCTGGG CGCGCTGCTG TGAAACGTCC TGACCTGTGA TCACACATGA 001200 001201 CAGTGAGGAA ACCAAGTGCA ACTCCTGGGT TTTTTTAGAT TCTGCCTGAC ACGGAACACC AGGTCTGCTC GTCTTTTTTG 001280 001281 TGTTTTATAT TTGCTTATTT AAGGTACATT TCTTTGGGTT TCTAGAGACG CCCCTAAGTC ACCTGCTTCA TTAGACGGTT 001360 001361 TCCAGGTTTT CTCCCAGGTG ACGCTGTTAG CGCCTCAGCT GGCGGTGACA GCCGGCCCAG CGTGGCGCCA CCACACACCG 001440 001441 CAGAGCTGTC CAGGCACAGC TCCGTCCCCA GCGCTCATGG TGTTGAAACT GTCTGTCATG CACCACGGTG TCTGTGTCCA 001520 001521 CACAGTAATA AACGGTTTAC TGTCCGC |
Predicted Small Protein
Name | NONHSAT039656_smProtein_353:595 |
Length | 81 |
Molecular weight | 8671.9695 |
Aromaticity | 0.0625 |
Instability index | 73.97125 |
Isoelectric point | 6.68988037109 |
Runs | 14 |
Runs residual | 0.0361842105263 |
Runs probability | 0.0448431624902 |
Amino acid sequence | MFLGGGVLCPSRLQHQGRWCVRSAPPGRCELCNFTLCLLPPLLLPRAPSSTWSMSSHPEE EAVNTVFLSREATGGCDVVT |
Secondary structure | LLLLLEEELLLLLLLLLEEEEEELLLLLEEEELLEEEELLLLLLLLLLLLLLLLLLLLHH HHEEEEEEEELLLLLLEELL |
PRMN | - |
PiMo | - |