NONHSAT039572
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT039572 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1533 nt |
Genomic location |
chr14+:97928141..98017901 |
Exon number |
4 |
Exons |
97928141..97928669,97930167..97930234,97970718..97971323,98017572..98017901 |
Genome context |
|
Sequence |
000001 ATGAGGAAAA CAAAAGCTCA GAAACTATCT TGGAGTCAGC AAGTAAGAAG GAGCTTAGAA AGGCTTAACA TTTTCCATGC 000080
000081 TTCTGCCTGG CTTCAGAGCC CATGCACTCT GCCTTACCAC GGCAGGTGAA AGATGGCCCC AAATTCTTAG GTACATCTCC 000160 000161 TGCCAAAAGA CCCCTCCTAT GGGTTCTGTG ACTACTTCAA TGAAAAGAAT AGGGCAGAAG AGATGATGAG AACTTAACAT 000240 000241 CTGGCAGTGT CCATTTCCTG TCTTTTGAAA CTTTCTGTTA AAGGCCTGAG CCACGTATGA AGTGTGAATC TTCACACCAT 000320 000321 GCAAGAGAAG CCACATGTTA TTGCTCTGGT CAACAATCCC AGCTGACCCA ACCAGATAGT GTATCAGGCA TATGAGTAAA 000400 000401 GCATTCTTAG ATTCTTCAGT CCAGCCCTTC ACCAGCAGAA CACCATTCAG CAACCCTTGT CGGCATCATG TGGGACAGAA 000480 000481 GAACCACCCA GCTGAGCCTT ATCCAAATTC CTGACCACAA AATCATAAGC ACTTTCCTCT AGAAGCCTGA GATATTGGGA 000560 000561 ATAAGAGTCT CAGCCTCCAA GAGATGGAGA ACATATCACA TTGTTTAGTT GATATTCACT ATCATTAAGA CATAGCTGCC 000640 000641 TGTTATAGTA GATTATGAAA CCCTGGAGAT CAAGGGATTT GTATTAGTCT AGCATAGTGT CTGGCACATA GTAGGTATCC 000720 000721 AATAATATGT ATAAAATTGA ATTACAAATC TTTCTCAGGT TTAAATATTA GGTTGGTGCA AAAATCATTA TAACTAGGCT 000800 000801 CAAATACATC TTTATTAATC AAAGTAAGAA CCTTACAATC AACACATTTT TGCCAATGAG AAATAAGTTT GTTTACTCCT 000880 000881 GTAGGGTAAA AATCTGAGCT TCAGGATTCA ATGAACTCTT GGAAAGCATT TTCTGCATCC TGCTGGTTGT GGAAATGTTT 000960 000961 TCCCTGCAAA AAGTTTTCAA GATATTCGAA GTAGTGGTAG TCAGTTGCTG GGAGGCCAGG TGAACATGGC AGATGAGGCA 001040 001041 AAATTTTGTA GCCCAATTTG TTCAACTTTT GAAACTTTGT GCAATGTGCC ATTGGGTGTT GTCGTGGAGA AGAATTGGGT 001120 001121 CCTTTCTGTT GACCAAAGCT GGCTGCAGGC ATTGCAGTTT TTGATGCATC TCATCAATTT GCTGAGCATA CTTCTCAGAT 001200 001201 GTAGACGCTC AATTCCACTT TAAAATTGCT GCAGTGGCTG GGCACAGTGG CTCGTGCCTG TAATCCCAGC ACTTTGGGAG 001280 001281 GCCGAGGCAG GCGGATCACT TGACGTCAGG AGTTTGAGAC CAGCCTGGCC AACATGGTGA AACCCTGTCC CTACCAACAA 001360 001361 TACAAAAATT AGCTGGGCGT GGTGGCATGT GCCTGTAATC CCAGCTACTA GGGAGGCTGA GGCAGGATAA TTCCTTGAAC 001440 001441 TCAGGAGGCG GAGGTTGCAG TGAGCTGAGA TGGCGCCGTT GTAAACCAAA CTGGGAGAAA CAACAATATT CTGTCTCAAA 001520 001521 AAAAAAAAAA AAA |
Predicted Small Protein
Name | NONHSAT039572_smProtein_1025:1222 |
Length | 66 |
Molecular weight | 7404.7831 |
Aromaticity | 0.0769230769231 |
Instability index | 64.2430769231 |
Isoelectric point | 6.51397705078 |
Runs | 9 |
Runs residual | 0.0118269230769 |
Runs probability | 0.0386759308329 |
Amino acid sequence | MADEAKFCSPICSTFETLCNVPLGVVVEKNWVLSVDQSWLQALQFLMHLINLLSILLRCR RSIPL |
Secondary structure | LLLLLLLLLLLLLLHHHHLLLLLLEEEEELEEEEELHHHHHHHHHHHHHHHHHHHHHHHH HLLLL |
PRMN | - |
PiMo | - |