NONHSAT037924
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT037924 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1640 nt |
Genomic location |
chr14-:77247175..77252800 |
Exon number |
4 |
Exons |
77247175..77247374,77247743..77247936,77248247..77249119,77252428..77252800 |
Genome context |
|
Sequence |
000001 gggtgcggtg gctcacacct gtaatcccag cactttggga ggctgaggcg ggtggatcac ctgaggtcga gagttccaga 000080
000081 ccagcctgac caacatgaag aaatcccgtc tctactaaaa atacaaaatt agccgggcgt gatggcgcat gcctgtaatc 000160 000161 ccagctactt ggaggctgag gcaggagaat tgcttgaacc tgggaagcgg aggttgtggt gagccgagat catgccattg 000240 000241 cactccagcc tggacaacaa gagtgaaact ccatctcaaa aaaaaaaaaa gaaaagaaaa gaaaagaaag aaaactcagc 000320 000321 taggaattag aaacatcatt tgtcctcttg gcctgttcag ctggtgactg tagATTTGAT GAAAAGGAAA CTTGGGACTC 000400 000401 CGGAGGACCA AGATGGAGCG AGACGGTCAA TACTGATGGA CTTGCAGCTA GCACCATGGC AGCCCTGCCT GGTCTAAGGA 000480 000481 AGCTGGCAGG AGGCGATGGT ACCTGGCGGG GGCAGACTGC CCACCTCCCC ACTCCTTCAG AGGACTGTTT CCTGCCCTTC 000560 000561 ACACCATCAT CATGTTGGGC CCTGCATGTA TGTTCCTGCA CTTGGAGCGA GCCCAGGGAC ACAGGGCAGA CACTGGGCTC 000640 000641 ACAGATGTTG CTGCAGCTGA GCCAGAAAAC ATTCCAGGCA GGAAAAGCAG GTGCACACAT TCACACAGGC CTCTGGTCAC 000720 000721 TCGACCAGCC AGAATGAGAC GGACTCCTTG ACCTGGGAAG TCAAGTCCCA GTGGGAAGGG CTGGAAATCA CACGTGGTCA 000800 000801 ACTTCTTGGC TCTCTCTGCT CCCCAAACCC TGGCCCTAGG CTTGCTTTAT CATCACATCC CAAGGCCAGA GGGCTGCTGC 000880 000881 TGTCCCCATC TTGGCCCTGC TAGAAGAGGG ATAGGGGTGG CTGGCATGAT GGGTGAGGGG AACATGAGAA TATGCAGAGG 000960 000961 CCTTGGAGGA AGAGGACTGG CAGTTATGAC AGGAAGGCTC TCTATACCTG GCTCCCCAGT GTTCTGCCCC TGGCACTGAG 001040 001041 CATGAGGAGC CAGGCTTTGG GGAGACTTTG CAATCACCCC CCCAACCTGG TCCATTTTCC ACAGGTAGCT TTCTTGAACT 001120 001121 CACCTTGACC CCTCCTCAGC CAGCAGCCCC CACCTCCAGG GGCAAAGGAG CTGAAAGACA GTCCTGAACT GGGGGGAGCT 001200 001201 GGGATCACAT CAGCCAGGCC CTGTCCCTCA CAGGAAGTGA GATGAGGGCT CTGGGAAAGG ATCCTGCAAG TTGGAACCTC 001280 001281 CTAAGACTCC AGAACCAGGA GCGGCTCCCT CTCATATCTA CTCCCCTCAA ACCCTGTCAT TCCCGGGAAG CTCCCAGAGG 001360 001361 CAGCTGAGGC CACGCCCCTG CTCCTGAGCG GCAGCATCCA GACCCGGAAA GGACCTAGTT TCAGCCTGGC ACCTCCCAAG 001440 001441 GCCAAGAGCT ACACTGTCTG TACTCCATGC GCCACCCCCG CTGGTGACCC AGCAACTGCA AAGGGCCTCT GGTTTGTCCC 001520 001521 GCTCTGGGAG GAGACTCAGT GGCTTTTCCT CCTCCTCAGC TGCAAGGATC CTACCCCAGC CCAGCCCAGC TCTGAGAAAC 001600 001601 AGGACTTTGC TACAGCCCGC CTCAAAGCAT CTTGGTGGAC |
Predicted Small Protein
Name | NONHSAT037924_smProtein_455:736 |
Length | 94 |
Molecular weight | 10021.243 |
Aromaticity | 0.0752688172043 |
Instability index | 55.6698924731 |
Isoelectric point | 6.38482666016 |
Runs | 11 |
Runs residual | 0.0126443647949 |
Runs probability | 0.049260490437 |
Amino acid sequence | MAALPGLRKLAGGDGTWRGQTAHLPTPSEDCFLPFTPSSCWALHVCSCTWSEPRDTGQTL GSQMLLQLSQKTFQAGKAGAHIHTGLWSLDQPE |
Secondary structure | LLLLLLHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEEEELLLLLLLLLLLLH HHHHHHHHHHHHHHHLLLLLEEELLLEELLLLL |
PRMN | - |
PiMo | - |