NONHSAT037839
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT037839 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1188 nt |
Genomic location |
chr14+:75548828..75549988 |
Exon number |
2 |
Exons |
75548828..75549112,75549136..75549988 |
Genome context |
|
Sequence |
000001 GAATTCCGAG CTTAAATGTT TATTTAAAAC AGAARTGYCA MACCACTCCA CTCTCAACCT TTCAMGCAAC CTGGCTAACA 000080
000081 CATAAACTAG TYCTYCTGCA ACAATGTTAG AGCAGAGGAG TAACTCAGGT TATACTGTAA CTCAAAAGCA ATMCTACTAG 000160 000161 AAAACTTAAA ACACCTAGCA CTGCATAAAG AAAAARRGCA GGACAAAATT TAAAGAGAAT TAGCTACAGA AAACCATTCN 000240 000241 AAGGCATTTC TACTGCCTCA TCTTTYMCTC CATCCCCCCT TTGGAACTGG GTTTCTTNDT TGGATACTBG TTTGGGYGGG 000320 000321 GAAAAAAATC ATATGGCTGT CCCAGGCACA ATATGGGAAA AGTGCAAACT GGCTCTTAAG GACACAGGAC TTAGATTCTC 000400 000401 AGCCAGRTTC AATAGCAAAT CTWGACTTCC CAAGGGAATA TGCTAGAGAA AATGACCACA GCGTTCCACT GCTAGGGAAA 000480 000481 GGCTCCCCTA TGAACAAGAC CAGGGCACTC ACCCACCCCC GGCAYTCACT TTCACCCCAC CTTCTCAGCA ACCTGCCCAT 000560 000561 GTCCATCAGC TCCATGGCAG AAGCAATCCT CATGATGAAC ACCCAAACTT GACCCAGCCT CTCAGGCCTG CTGAGATGAT 000640 000641 GAGCATGAGG ATACAGGGAC ATGACAGGTC AATCGGTCCT CAAGAAAATC AAAGTTGCAT TTACATGCTG AACCAAAACC 000720 000721 CACTGTTACA GTTTATGACA ACCCCCGCAA GTCCCCAGAA CTTGCAACTT TAAYCAAAGT TTGGCTGCTT CCCTTATTTC 000800 000801 AAGAAAAGGT TTCAGTGATT ACATTAGTAC TWATGTACTA GGCTTCCCAG AACTGAGAAA ACAATGGGRA CATCMAWCCA 000880 000881 AAGARGATCC CATTGAACAG AGTTGCCTGT CCCGAGCAAT GGGGTTCCTC CCCAAGCATC AGCCTTTATG CCACCAGTTT 000960 000961 TGGAGAAATG GCAAAATTTC CATTGCACAA GACCTCCCAC AATGTTGATA AGATTATCAA ACATTTTGGT CTGGGGAAGA 001040 001041 TGAAACAAAA TTAATTTAGC TGTTTATAGG AAGGTGGGAT GTGAGACTCA TCAAAGGTAG GATGTGTGAC ACMAAATACC 001120 001121 ACAGGAACAT TTTACAAGGC TAGGTGGAAA TACAAAGCTC ACATCCTTAA GGAAACCATC GGAATTCG |
Predicted Small Protein
Name | NONHSAT037839_smProtein_635:772 |
Length | 46 |
Molecular weight | 5163.9312 |
Aromaticity | 0.0444444444444 |
Instability index | 87.1555555556 |
Isoelectric point | 6.50201416016 |
Runs | 8 |
Runs residual | 0.0155303030303 |
Runs probability | 0.026055467232 |
Amino acid sequence | MMSMRIQGHDRSIGPQENQSCIYMLNQNPLLQFMTTPASPQNLQL |
Secondary structure | LLEEEELLLLLLLLLLLLLLLEEEELLLLHHHEELLLLLLLLLLL |
PRMN | - |
PiMo | - |