NONHSAT037033

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT037033

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

603 nt

Genomic location

chr14+:56382445..56383047

Exon number

1

Exons

56382445..56383047

Genome context

Sequence
000001 GAGAACATGT TGTTTTCCTT GAAGTACTTG TTTCTTCCGT AATTTCATAT CTAATCTCCC AGCTTCACAC ATAACAGATT 000080
000081 TGCTTGACAA TGTCCTAAAG GATGGGGACA GTCTTGGCTT TCACATGAGA AGAGCTAATT AGAACAACTG ATTTTACTTT 000160
000161 GGGAGAAACC AAGTTTCCAG CATGCATCTA GTGATAAATT ATGAAAGCTT TCCTCAGTAC TCCTGCCCTA TGATCCTTCC 000240
000241 CTCACTTCAT TAAGCCTGCT GCATCTTGCA TGGATGGAGG TCACAGATGG CAGAGCAGCT TCTTGGATGA ATTGCAGGGT 000320
000321 CTCCCAACTC TTCAAGCAGC ATCCTCTGTG CTCCCACTCC TGTGCTCATC TCTACTCCTG AACTACAGTG CCATCTTGTC 000400
000401 ATTTGTCTGT TTCAATGTCT GTTTCTCCAA CTGGACAGTA AACCCTTGGA AAAGAAGAAC CAATCTTATT TAAATTTGGT 000480
000481 ATCCTCAGCA ACCAGGACAG TGCCTGGTAC TTTCCAGGTC CTCATTAAAT GTTTTTTGGA TGGATGGATG AATCAATAAA 000560
000561 AGAAAAACTC CAAATGAAAC AGTTGTGGAA ACTAAAAAAA AAA
[back to top]

Predicted Small Protein

Name NONHSAT037033_smProtein_269:472
Length 68
Molecular weight 7560.6672
Aromaticity 0.119402985075
Instability index 60.3
Isoelectric point 7.74652099609
Runs 10
Runs residual 0.0059388919278
Runs probability 0.0443914502738
Amino acid sequence MDGGHRWQSSFLDELQGLPTLQAASSVLPLLCSSLLLNYSAILSFVCFNVCFSNWTVNPW
KRRTNLI
Secondary structure LLLLLLLLHHHHHHHLLLLHHHHHHHHHHHHHHHHHHLHHHEEEEEEEEEEELLEEELLL
LLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLL
LLLLLLL
PiMo oooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTTiiiiiiii
iiiiiii