NONHSAT036162
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT036162 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1309 nt |
Genomic location |
chr14+:29288805..29306943 |
Exon number |
6 |
Exons |
29288805..29288883,29289193..29289256,29294061..29294252,29299279..29299712,29301212..29301266,29306459..29306943 |
Genome context |
|
Sequence |
000001 cctcagattc aaataccggt ttctagaatt atccaattag aggaagtagg gcctcttaaa gaaacgcctg attctaggac 000080
000081 cttcaaggag atggaacata actcttcctc agtccttaag tgtgaactgt gcatagcgac ttcccttatt gatgttaatt 000160 000161 ttgatccctt ggtccagatg ttgtccagtc ctctactttc tggttactgt ttcccctcat gcagctaata ggcattctgt 000240 000241 agagaaacat ttaaaaacca tgtaaataac ctgcttttca ttaaaatttt gctcctacat tcagcatcca ttgatgattc 000320 000321 ttgtctgacc caatgCCCAG TATGAGACCG ACCCAGGTCT GCCTTAATAT ATATACCGTA ATATATACCT AACAGttttt 000400 000401 tttttttttt tgagagggag tctcgctctg tcgcccaggc tggagtgcag tatcgcgata tcggttcgct gcaagctccg 000480 000481 cctcccgggg tcacgtcatt ctcctgcctc agcttccgga gcagctggga ctgctggcgc ccgccactac gctcggctaa 000560 000561 tttttttgtg tttttagtag agacgggctt tcaccgtgtt ggcctagcgg ttctccaact cctgacctca tgatcccccc 000640 000641 gcctcagcct cccaaagtgc tgggattaca agcgtgagcc accgcgaccc gccAACACTC TTGACAACAG TGCTGTGCTA 000720 000721 AGAACTTGGG GGACTTCAAA AAGTTCACCA GTTCCTGTGT CCATGGTAGG GTGAAAAGAT TTTCTACATC TTTCCTTGAC 000800 000801 TAGAAACAGA AGTCCTGAAA CAAGaatata acgtcaggag gccagaggct ttgtcctgcc taatgtgtta tttccacact 000880 000881 gaataaaagc acctgagtcc tggtaagtgc tcatatgatt ggctcaataa aagaatAATA AATGAATTGG AAAGAGGAGA 000960 000961 CAGTGAAGGA TATAGGAGAt gtacctgata gcaacttact gcctctcagc tcaaaattca cccttcaaaa ccttttctac 001040 001041 accaatggat agaattcctg tcagcatttc tcttttacgt tgaacacaat gttaagcttc ctcagtgaag gaccctagat 001120 001121 ggacattgca ggaagaaggg acttcccctg ttggacctag aggttgtacc agcattgtag gtgggaggac atccactggc 001200 001201 tctttgcaat agccatgtgt ccataaagta tagtttctca gcaatctcat tgcccagtct aggcttggca atcaccctcc 001280 001281 tgcagcctta tcaacacatt gctcgaggc |
Predicted Small Protein
Name | NONHSAT036162_smProtein_941:1051 |
Length | 37 |
Molecular weight | 4115.5729 |
Aromaticity | 0.111111111111 |
Instability index | 41.8058333333 |
Isoelectric point | 4.43695068359 |
Runs | 6 |
Runs residual | 0.0137917637918 |
Runs probability | 0.0351969616675 |
Amino acid sequence | MNWKEETVKDIGDVPDSNLLPLSSKFTLQNLFYTNG |
Secondary structure | LLLHHHHHHHHLLLLLLLLLLLLLHHHHHHEEEELL |
PRMN | - |
PiMo | - |