NONHSAT036096
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT036096 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1785 nt |
Genomic location |
chr14-:27061953..27063723 |
Exon number |
1 |
Exons |
27061953..27063723 |
Genome context |
|
Sequence |
000001 GGTTATTTTA TCTTTATGGC TGTCAAAAAC GTTAATTCAG TGCTGAGGGA ACCAATACTG CTTTAATTTT TTTCTTCCTG 000080
000081 GTGGAAAAGA AAAGCTGATT TGCTTTCAGT GATCTAATTC AGTAAGAGTT CTTTAATACA GCAAAGACAT CTGGCATGAA 000160 000161 TGTAAGCAGA ACATTTGGAG GACTTCTTTT TCATAGCCAA TCACTTGGTA TTAGAAATGG ACCATTATAC TGGATAAGAA 000240 000241 GGTTTTAGAA TGGTTGAAAC TATCATTTAG TTTTACAAAT TAAATGTAGT ATTTTTTGTA AACATTAAAC TTATTAAACT 000320 000321 AAAAGGTAAT ATATTAGACA CGATGTTCCT CTAAAGTTTG TTTCCTATGA GTGTAGTTTT GCAGATGGCT TTCCTTGTCT 000400 000401 CTGAAACTTT CCTTATGCAT TAAGAAAGTT TGCTAACATA TTCACATTCA TATGTTTAAA AGGTATATTA TGATAAAAAA 000480 000481 AATCAATGTG GAATTGTGAA AACCCTTAGT ACAAATAAAA GCACTCAAAA GAGCTTGATT GCAGAATTAA TAACGTGATA 000560 000561 GTTCTAGGAA AAGAGCTGCA ATGGTAAATT AAATTCACTG TCAATAGATG AAAATGAAAT AGCTTTTTTG CATTATACAT 000640 000641 GAGGTGGTAT CAGATGTGCA GGGATGTTAC AGAAAATTGG TGTTTATCAA GGATATTCCA AATAGTAAAT TAAATGCCTT 000720 000721 TTCATTTGAA TATAGTTTAT TTTCAGTGGG TTGGAAAGGG TGCACTGAGA ATTAGATCTT TTGTTTTTAG TCCACTTAGT 000800 000801 TGTACATTTT TTGCTTATTA CATTGAAATT GATTATTTTA TTTATAGTTC TGAGGCATGT TATTTGTATA GAGCAAGAAT 000880 000881 ATCTGTTGGA AAAAAATGGA AAGCTGGAAT GCGTTGAATA AAATTTTGTG TGTGTGGTGA CGTAACCTGA TCAAATGTGA 000960 000961 GTTGAAATGT TGGATAAAAG AAGTCTATAC TTTACCGGTA ACAGGTGGAA ACCAATCACA CAGTATGGGA TCAATTTTAA 001040 001041 GGATAAAATA AAGCCTCGTA GTTTATAAGA AGCTTAAAGA ATTCTGAACA GTTTGTATTA AAATACAATT TTAACTGGAT 001120 001121 TATTACCTGT TTGGACAGAT AATCTCTTTG CTTCAGATAG ACATTAATTT TAATAGTCTT TCTCTTCGCA CTTGACCACA 001200 001201 AGTCTTCAGA ATAATTTTAA GATCCCGGTA TTCTTCAACA TAGCCTCTGA GCGCTTTTCA GTTTCTCTTA CTCAGATGTA 001280 001281 CGTAAGGGAC ACTTACCTTG TACATCTCAG ATGAGCTAAA TTATAAACTG TGATCATATC ATCAAGTTAT AAAGAATTTC 001360 001361 TTAGAGGATT AATGAAATCA TTTGGAAGCC CGTTTTTGTG TCTTTCATAC ATATATGAAG TTCTTAAAGC TATATATATG 001440 001441 TATATTTATG ACTGTCATAA TCTACTGGAA CAAATATGCC TAATGTTTAT TTCATGAAGC CCCTTTTCTG TTTCTCATTT 001520 001521 GGTAAGAGCA TATTTGGGGA AAAGTCTACT TTAGTTGTAT AACCTAATGG ATTTTCTCAA ATTACCCAAG TTTTTAAGCA 001600 001601 GAATGTAATT GTGTTTGTAA GGTTTAGTTA AAATACTAGT GTGTTTTCGG AAACTTTCTT CAGGATGTGT AACACAGAAT 001680 001681 ACAGACACAC TCGGGACATT TTAATACATT TTAACTCAAA CGATAGGTAC TTTAAAGAAA TTATAGCCAA TATAATTTCC 001760 001761 TTGTATGCTT AAAAAAAAAA AAAAA |
Predicted Small Protein
Name | NONHSAT036096_smProtein_713:916 |
Length | 68 |
Molecular weight | 8007.3389 |
Aromaticity | 0.238805970149 |
Instability index | 62.076119403 |
Isoelectric point | 9.64178466797 |
Runs | 12 |
Runs residual | 0.0357896381965 |
Runs probability | 0.0545471942531 |
Amino acid sequence | MPFHLNIVYFQWVGKGALRIRSFVFSPLSCTFFAYYIEIDYFIYSSEACYLYRARISVGK KWKAGMR |
Secondary structure | LLEEEEEEEEEELLLLLEEEEEEEELLLLLLEEEEEEEEEEEEELLHHHEEHHHHHEELL LLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL LLLLLLL |
PiMo | ooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiii iiiiiii |