NONHSAT036025
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT036025 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
2300 nt |
Genomic location |
chr14-:24695811..24701561 |
Exon number |
3 |
Exons |
24695811..24697918,24700858..24700943,24701456..24701561 |
Genome context |
|
Sequence |
000001 TGCAGGCAAG AGTGCTGGAG GGCGGCAGCG GCGACCGGAG CGGTAGGAGC AGCAATTTAT CCGTGTGCAG CCCCAAACTG 000080
000081 GAAAGAAGAT GCTAATTAAA GTGAAGGAAC CAAAGCGGGG AGTGTGTTCA GTCAGTACCT GCCTTTCTGA GCCTGGCATC 000160 000161 CTGGACCAGC CTCACTTCCT TGGCTGAGGC AGgttctcac tctgtcgccc aggcttaggg tgcagtggtg ccatcacagc 000240 000241 ttactgcagc ctcgacctct caggcccaag caattctccc atctgagcct cctgagtagc tgggactaca ggcgtgtgct 000320 000321 accaccatac ccagccaatt gttttatttt tttgtagaga tgcggtctca tcgtgttgcc cacgctagtc taaaacttct 000400 000401 ggggtcaagt gatcttccca cctcatcttc ctaaagtgct gggattacag ccgtgagcta ccatatctga ccCCTTTTTG 000480 000481 AAttattatt atttttgttt tgttttgctt ttgagatgga gtctcactct gtcgcccagg ctggagtaca gtggcacgat 000560 000561 cttggctcat tgcaacctcc gcctcttggg ttcaagcgat gctcctgcct cagcctccca agtagctggg actacaagtg 000640 000641 cccaccacca tacccggcta acttttgtat tttagtagag acggggtttc gccatgtttg ccaggctggt cttgaacgcc 000720 000721 tgacctgagg tgatccaccc acctcagcct cccaaagtgc tgggattaca ggcatgagcc accgcgcctg gccTCAtttt 000800 000801 gtttttgttt tgagacattc ttactctgtc acccaggctg gagtgcagtg gtatgatctc ggctcactgc aacctccacc 000880 000881 tcccaggctc aagggatcct cccaactcag cctcccaagt agctgggact acaggtacat gccaccacac ctggctgatt 000960 000961 ttctgtattt ttagtagagg tggggtttca ccatgttgcc caggctggtc ttgaactcct gagctcaagt gatccacctg 001040 001041 ccttggcctc ccgaagtgct gggattacag gcgtgagcca ccatgcccag ccGAATGATT CATTTTCAAC TGCTGTCTCT 001120 001121 GTGTAGCTGA CTTCTTCCAT ATTTTTCTAT AAGATTTTAC AATTAAATTC TTCCTGATTT AAATCTTGTT ACCTTGTCTC 001200 001201 TATGGTTCTA AAATTAAATG CATCATCTTC TGTCATAAGC CATATCCCAA TACCCATCTC GTGTATTAAT CCCATCAATC 001280 001281 ATTCAGGTGT CTGGAATACA ATTCTTTAGA GTCATTTAAA ATTACGTGGT CCTTTTATAA GATCTAATTT TTCACTTAAA 001360 001361 AGCTCTTTCT GTTTGATTTT TGTTTCCATC TCCATTACCC TCATTCTGGT CTCGGGTCTT ACTCATTTAT ATGTTTATGT 001440 001441 CTCTGTAATA CATCCAACCA GGTTTTCCTA CCGTCATATC CCCTCTAAAG TGTAGTCTAA ACCAAGACAT GACGTACAAA 001520 001521 ACCATAATGT GCAGGTCTTC CTTTAGCTTC TTTTTCATTA TATTACTCCC TAACCCCAGA TCCTTCATTG ATTTCCTCAT 001600 001601 TGCAGATTAC TTTGGCAACT GTCTTTACTG TGTGaatcag ttttctcatt catgtttttt aacatacagt aaaatgcaca 001680 001681 gttcttaagg gtttagttca gtgagttttt gacaatagca tacgttcatg taattacaaa atctaaacat ttgtattcct 001760 001761 accccctcaa gagtttcata ggttagtttt gcttgtttta gaactttata taaatggaat tattgaatgt acaatttttg 001840 001841 tatctggctt ctttcattct gcataatgtc tactgtaatc tgtggtttat tccttcttat tactgaatag tattccattg 001920 001921 gatgaattat atcataattt gtttatccat tctcctgttg atgggtgttt gagttatctc cagtttctgg ctattatgaa 002000 002001 aaagtcttct atgaacattg ttatacgagt gtttttgtaa acatatgttt ttatttcctt tggataaata cctaagaatg 002080 002081 aaattactag gtcatgtggt agatatatgt aactttaaaa agaaactaag ggtttgtacc attttatatt cccacctgca 002160 002161 gtgtatgagc attccagttg ctctgtaccc ttactagacg gtacccttgt agcaccataa aaatgctgat gtcagtcatt 002240 002241 tttattttgg ctattatagt gTTATAATGT TATATAAATT AAAACACTAT ATCTAGTGTT |
Predicted Small Protein
Name | NONHSAT036025_smProtein_515:727 |
Length | 71 |
Molecular weight | 7758.8502 |
Aromaticity | 0.1 |
Instability index | 60.91 |
Isoelectric point | 6.79388427734 |
Runs | 13 |
Runs residual | 0.0408769448373 |
Runs probability | 0.0303357656299 |
Amino acid sequence | MESHSVAQAGVQWHDLGSLQPPPLGFKRCSCLSLPSSWDYKCPPPYPANFCILVETGFRH VCQAGLERLT |
Secondary structure | LLLLHHHHLLEEEELLLLLLLLLLLLEEEEELLLLLLLLLLLLLLLLLLEEEEEELLLEE ELLLLLEELL |
PRMN | - |
PiMo | - |