NONHSAT035424
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT035424 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
524 nt |
Genomic location |
chr13+:115045310..115045833 |
Exon number |
1 |
Exons |
115045310..115045833 |
Genome context |
|
Sequence |
000001 TTGACTTGGG GGGAAAAACA TTTGGACATT TTGCTGGCTA GGTTTACGAA ATATACACAT CCAGCAAACA TGTGAGTCCC 000080
000081 TTTAGGGTAC AGTGCAGTGA AGGGAGAAGT GGAAATACTC AAGGTTCTGG GGAAGGTCAA ATGAAGGGTC CCTCACATTG 000160 000161 GCTGAGGCCA ACCTGGCTTC AGAGGTGTGC AGAGGCACCA GGCCGAGAAC AGGGCTTTGC AGTGGTGAGG GCAAAACATG 000240 000241 AACACAAGAA ATACCCTAAG TTACTGACCT GGTTGTGCCT GGTGACAGAT GGGACCAGCT CTTTTCTCCA TTTGGTAATT 000320 000321 TTGGAAAATT TGGCAGAGTT AATAAAGAAA TCCCCTTGGT GCAAGATTGC TACAATAAGA ATCTATTATA GATGGCAGAT 000400 000401 GTGAAGTTCA CAGTCCTTTT TATTATCCTA ACCTAGTAAC ATGACTAGAG GTAAAATTAA ATATTGAGTT AGATGATTGT 000480 000481 TTAATATTTT AAAACCAGAG GGAAGACATA CAAATAGATT GAGA |
Predicted Small Protein
Name | NONHSAT035424_smProtein_140:403 |
Length | 88 |
Molecular weight | 10276.073 |
Aromaticity | 0.114942528736 |
Instability index | 40.008045977 |
Isoelectric point | 9.81719970703 |
Runs | 14 |
Runs residual | 0.0226600985222 |
Runs probability | 0.0483319453908 |
Amino acid sequence | MKGPSHWLRPTWLQRCAEAPGREQGFAVVRAKHEHKKYPKLLTWLCLVTDGTSSFLHLVI LENLAELIKKSPWCKIATIRIYYRWQM |
Secondary structure | LLLLLLLLLLHHHHHHHLLLLLLLLEEEEEEHHHLLLLLLLLEEEEEELLLLHHHHHHHH HHHHHHHHHHLLLLLEEEEEEEELEEL |
PRMN | - |
PiMo | - |