NONHSAT035424

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT035424

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

524 nt

Genomic location

chr13+:115045310..115045833

Exon number

1

Exons

115045310..115045833

Genome context

Sequence
000001 TTGACTTGGG GGGAAAAACA TTTGGACATT TTGCTGGCTA GGTTTACGAA ATATACACAT CCAGCAAACA TGTGAGTCCC 000080
000081 TTTAGGGTAC AGTGCAGTGA AGGGAGAAGT GGAAATACTC AAGGTTCTGG GGAAGGTCAA ATGAAGGGTC CCTCACATTG 000160
000161 GCTGAGGCCA ACCTGGCTTC AGAGGTGTGC AGAGGCACCA GGCCGAGAAC AGGGCTTTGC AGTGGTGAGG GCAAAACATG 000240
000241 AACACAAGAA ATACCCTAAG TTACTGACCT GGTTGTGCCT GGTGACAGAT GGGACCAGCT CTTTTCTCCA TTTGGTAATT 000320
000321 TTGGAAAATT TGGCAGAGTT AATAAAGAAA TCCCCTTGGT GCAAGATTGC TACAATAAGA ATCTATTATA GATGGCAGAT 000400
000401 GTGAAGTTCA CAGTCCTTTT TATTATCCTA ACCTAGTAAC ATGACTAGAG GTAAAATTAA ATATTGAGTT AGATGATTGT 000480
000481 TTAATATTTT AAAACCAGAG GGAAGACATA CAAATAGATT GAGA
[back to top]

Predicted Small Protein

Name NONHSAT035424_smProtein_140:403
Length 88
Molecular weight 10276.073
Aromaticity 0.114942528736
Instability index 40.008045977
Isoelectric point 9.81719970703
Runs 14
Runs residual 0.0226600985222
Runs probability 0.0483319453908
Amino acid sequence MKGPSHWLRPTWLQRCAEAPGREQGFAVVRAKHEHKKYPKLLTWLCLVTDGTSSFLHLVI
LENLAELIKKSPWCKIATIRIYYRWQM
Secondary structure LLLLLLLLLLHHHHHHHLLLLLLLLEEEEEEHHHLLLLLLLLEEEEEELLLLHHHHHHHH
HHHHHHHHHHLLLLLEEEEEEEELEEL
PRMN -
PiMo -