NONHSAT034982
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT034982 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1668 nt |
Genomic location |
chr13-:102372163..102373830 |
Exon number |
1 |
Exons |
102372163..102373830 |
Genome context |
|
Sequence |
000001 TCAGAATACA GTCTGTTGAA TTATCCTAGA TGAAAATAAA GGCAAACCAA CACATTCATC CATGAGGATT TTGGTCCATT 000080
000081 CCATTTATTT TCTTTTATTT TGCATTCTTA ATTTCCTTTT TAGTTTAACA CTGTTTGTTT GAGCTTAGGG AAGACAACTA 000160 000161 CCAAGAAAGG CCAGGAACAG TTGACTACAC AATGAAGATT CCATGCAAAA TGTTCAATAT TGGATCTAAA GGGGTTCAAA 000240 000241 ATGTTTCATA CTAAACTGTT TGGGAATTTA TTTGTTAACT CTGTGTACAC CTAATAAAAT TCAATGTTTT CTTCTCAGAA 000320 000321 GAGTTCATTG AGACCAAACT GAACCTCATT TATTGAAAAT TATATGTGGG ATCAATGTAC TGGCCTCTTG TTATTCTTTC 000400 000401 TATGTGGGAG GATGACCCAG TCATCATTTT CCCCATCTGC ACTGTATTTA TTGGGAAATT ATTTTGTCAC TGCTTTCATA 000480 000481 AATCTTCTTC ATGACAGCCC TTGCCCAGCA TTAAAAAATT CTGGCCTGCT TAGCTGATTA AAGGTTTAGT AGAAATTTAA 000560 000561 CTGTTTGTTT ATGCTTATTT CATTTTCATA TTGGATTCTA CTTGAATAAA TAAAAAGTTA GCAGAACGTT TGAGTAGATT 000640 000641 TATTGCCAAT GATGCTAAAT TACAAATCTA ACAAACAAAA TGATTCCTTT GGTCATTTTT GATTTGGTGT TATGTCATCT 000720 000721 TGAAGCCTAT TGTTTTTAAC AGGAACAGTT AAAATATATT AGATAACTTC CATTAACCAA TTATTTTCAG AAAACATAGA 000800 000801 TCCCATAATA TGTGGCCAAC TATATGAGTA ATTAACTAAC TTGTAATACA GTCAAATGGG CTTATGGACA CTACTTACAG 000880 000881 CAGCAACACT TCACTTCACA CAAACACACA CATATACACA CACACACACA CACACACACA CACACACACA GAGCAAACAC 000960 000961 CCCCATCTAT TTGTTACTGA TAATTAGCCC TACTTGCTGG TTTCTTTTTC CCCTGCAAGT CTGTTTATTG GTTTAAATTA 001040 001041 AGACAAGATT TATTTTTGTA AATGACTGAG ATTTATGTAA ATGTGTATCT CTGTTGTGTT TTATATATGG GGTGTCTATA 001120 001121 AGGGCATTTA TCCCTATGAA GGATGTCAAA TACTTTCTTC TAATATATGT TTAGACATAT TGCAGAGGGG TCCTTGTTAT 001200 001201 TTGTAATTGA GTTAGGTCAT TTACTTTGTG TCTGGTCTCA CCTGTAGCAT GGGAAGAGGA CAGCAATGAT GAGCTGCATG 001280 001281 TAGTAGGTAC CTGTGTATCA AGAACTGTTG GTATGTATTG CTAATTTGCA TACAAAGAGT TTGTCTGTCT GCATTGTAGT 001360 001361 TTGTGTTTAA TATCATTTGT TAAATTCACA AATACAACAT ATTGAATAAA ATATTTATAT GAAGGCATAT TAAAAAACAT 001440 001441 CAAACAACTT TATGTAACAA AATGGCATTG CATTACTCAC CAATATAGAG AAATGTCATG TAAATAAGTT GGTAAACTCA 001520 001521 ATTTCCCCCT TTACCATGCC AAAGAAAATT TTAGCTCTTT GATGATACCT CTCTTGCTAT TTGTTTGGGA TAAGACTTCG 001600 001601 CCATTTTTTT CCCCTCAGAA ATTAAGTTTG CTGTTATTAA GTAAGAAGTG CAATCTGTCA CTACTGAT |
Predicted Small Protein
Name | NONHSAT034982_smProtein_374:493 |
Length | 40 |
Molecular weight | 4604.5 |
Aromaticity | 0.179487179487 |
Instability index | 61.2230769231 |
Isoelectric point | 5.95635986328 |
Runs | 8 |
Runs residual | 0.0363876319759 |
Runs probability | 0.0431792086203 |
Amino acid sequence | MYWPLVILSMWEDDPVIIFPICTVFIGKLFCHCFHKSSS |
Secondary structure | LLLEEEEEEEELLLLEEEEEEEHHHHLLLEEEEEELLLL |
PRMN | LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLL |
PiMo | ooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiii |