NONHSAT034210
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT034210 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1102 nt |
Genomic location |
chr13-:66982202..66983303 |
Exon number |
1 |
Exons |
66982202..66983303 |
Genome context |
|
Sequence |
000001 CTCCTTTTTT TTTCATTTCT CAAAGTCTGT ATGGAATTCA AGCATTAAAT CTCTCTGCCT CTACCCAATC CAGTCCACAC 000080
000081 ATAGTCCTCC TTATTTTAAT CTCTTCCTCT TTCTCCCTGC CATTTCATTC TATTCTTGTA TGTATTCTTT CCATTATATT 000160 000161 ACCTAATCCT TACATAGGAA GCATTTCTAT ACTGTCTGCT TTACTTCACA GAATCTCCTC AATATGTTTC TATAGCCTTA 000240 000241 GAAGTAGGAA GATTTTTGTC CTTATATGTC AGTACAGACT TTTTTTCCTC CCCAGAAAAA TCTTAAAAGC TAAAATTTAT 000320 000321 CAAGTGAAAA AGAAATAGTA ATTTTGAAAC TGGAAAATGT TTACTACCTA ATGCCATTTA ACTTAAGCCT ATTCAGTGAT 000400 000401 TTCGTGTATG TGACTTCCAT AATTATTATT TGAAAAAAAA AAGGCAGAAG AAGAAAAGGA CAAAAAGAGA GAGTGGGGTA 000480 000481 AAGCAGTGTG GGATAGGAAG AAGAGAAAAA TATGTGCATT TGCATTTGGT TGTTCAAGAC TCAAAGCAAC TAGGCATTCA 000560 000561 CAAGGAGCTA TCCAAATGTT TATAGTAGGT TCTACTATTT AATGAAAGTA AAACAAACTA AAACCAAAGA CTGTAATTAT 000640 000641 GTTTAACATT TCCAATTTTT TAAGGAATAT AAGCCAAAAT GTATCCATGT GTATCCATGA TTCTAGCTTA CTTAGCTCCT 000720 000721 GTTTATGAAA ATGTATATCC AGAGAAAAAG TAGTTATTTT ATGTTACATT TACTAACATT TAAGTTCTGT CATCCCTGTT 000800 000801 AAGGAAATTG GGAATGGAGA CAATTCCTCA GTAATCATAC CGAAGTTCCT GCTGCTTCTC TGCCCTTCAA AAGTGATCCC 000880 000881 TGCTGGGAGA TCGAGACCAT CCTGGCTAAC AAGGTGAAAC CCCGTCTCTA CTAAAAATAC AAAAAATTAG CCGGGCGCGG 000960 000961 TGGCGGGCGC CTGTAGTCCC AGCTACTCGG GAGGCTGAGG CAGGAGAATG GCGTGAACCC GGGAAGCGGA GCTTGCAGTG 001040 001041 AGCCGAGATT GCGCCACTGC AGTCCGCAGT CCGGCCTGGG CGACAGAGCG AGACTCCGTC TC |
Predicted Small Protein
Name | NONHSAT034210_smProtein_638:727 |
Length | 30 |
Molecular weight | 3274.768 |
Aromaticity | 0.0689655172414 |
Instability index | 94.375862069 |
Isoelectric point | 6.48834228516 |
Runs | 7 |
Runs residual | 0.0418103448276 |
Runs probability | 0.0135639841522 |
Amino acid sequence | MFNISNFLRNISQNVSMCIHDSSLLSSCL |
Secondary structure | LLLHHHHHHHHHHLLLEEEELLHHHHLLL |
PRMN | - |
PiMo | - |