NONHSAT033997
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT033997 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
919 nt |
Genomic location |
chr13+:53191693..53211581 |
Exon number |
6 |
Exons |
53191693..53191840,53196121..53196400,53201575..53201710,53203352..53203490,53206555..53206624,53211436..53211581 |
Genome context |
|
Sequence |
000001 GTGTTTCCTA GAGTCTCGGC GTTTCTACCT CTTCGCACCC TTTCCTGCCA CCCTTTGTCC CCTGGAAGCC CGGAGACATC 000080
000081 AGCGGCTGCA ATTTTGCTAC TCGCTGCTCG GCGTGGAACT GTCAGGTACC GCAGTTCAGC ACTTTTGGCA GGACAAAAAA 000160 000161 TAATATCCAA AGATATTTTG GCACTAACGG CGCTATCTGT AGCAAGAAAG TTGAGCAGTG TGAACTGTTG AGACTTCCAA 000240 000241 GGAGACTTCA GACAACCAAG ACAGTGTAAA GGAAAACAGA GAAAAAGACT TGTTAGACAT TATTAAGGGC ACGAAAGTTG 000320 000321 AATTGAGCAC AGTAAATGTA CAAACAACAA AGCCACCCAA CAGAAGTTCA CTTAAAAGCT ACAACTGGCG GGCCTCAAAG 000400 000401 AGCTTTAGGA CATGCTCCAA AGAAGAGGAT GAGCCCCTGA GTCCTGAGTT GGTGGCAGCT GCATCTGCTG CTCTGTTTTG 000480 000481 ACAAGCAAAC AAGCCAGAAC TGCTCAGGCA GCTCCGTAGC ATGAGGAAGA GTCAGGGGCA CAGAGAGATG GAGAGAGACC 000560 000561 TAGTAGTTTC AATAACAAAA TATCAGATAT GAAAATTGCC AGATGTGCTA CAGCTAGAAT TAATATAAGG CCAGAGCATC 000640 000641 AGATTCAGTT TGACCAAGGC TATGACAATT ATCCTGGCCT GGAGAAGACT GCTGATCTTA GAAAGGAAAA ATATATTCAG 000720 000721 GGGGAAGAGA TGTAATAGAT TTCACATTAT GGCAGTTACT AAAGAAGCAC GTGACAGACA CATCACCTTC ACTTTGGGAT 000800 000801 ATGGAATTTG ATAAGCAGTT AGCCACAGAA TATGAACAAC CCCTTGAGAA TGAGATTGAA GAACTGATCC AGGGGACAAA 000880 000881 AGAGGGGAAA CTGAGAGTTC CCAATTAATA ATGAAGCAG |
Predicted Small Protein
Name | NONHSAT033997_smProtein_800:907 |
Length | 36 |
Molecular weight | 4120.5484 |
Aromaticity | 0.0571428571429 |
Instability index | 63.0228571429 |
Isoelectric point | 4.33624267578 |
Runs | 7 |
Runs residual | 0.0188861985472 |
Runs probability | 0.0346102404926 |
Amino acid sequence | MEFDKQLATEYEQPLENEIEELIQGTKEGKLRVPN |
Secondary structure | LLLHHHHHHHHLLHHHHHHHHHHHLLLLLLEELLL |
PRMN | - |
PiMo | - |