NONHSAT033286
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT033286 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1710 nt |
Genomic location |
chr13-:39496864..39510336 |
Exon number |
7 |
Exons |
39496864..39497074,39497650..39497878,39503167..39503290,39505744..39506569,39508399..39508526,39509825..39509876,39510197..39510336 |
Genome context |
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Sequence |
000001 CCTGGATGCA GTTTGCCTAT GTGAAAGATC AGTAGAACTT AAAAATGATC ACAGTGAATA ACTTACAGTA GAAATTGAAA 000080
000081 AAATGATAAA TGAGTTTAGT GTACTACCAA AGGAACTATC TGAAACAAAA GAAATTAggt CATCACAGCT AGAGAGCCAA 000160 000161 CAAGTTGAAT GGGAACAAAA ACTCAGCAAT TTTTTACTTT AAAACAAGAA GAAGAGAAGA AATGCTGATA TGTTATATGA 000240 000241 AAAAACTAGG GAAGATTTAG GCAGAAAAGA AGAGGAATAT AAGAAAGAAA TCGAAGTGAA ACAACAACTT GAACTCAGTC 000320 000321 CGAAGATATG TTGCATGAAA ATTGCATGTT GAAGGGAGAA ATTGTCACTC TAAGACTGGA AACGGACACA ATAAAAACCC 000400 000401 AGGAAACAGT AACAAAAACA GTATCTGACT GTAATGGAGA GCTGAATGTT TTGACAGGTG AGAGCAGGTG AGAGATTATT 000480 000481 GCTCAGTTCT GAACTGAAGA AAGAAAAAGA AAACACGGAA AGACTGGAAA CAGAAGTTGA ATCCTATGGT TATACACTGG 000560 000561 CTGCTGCTAT ATGTGATCTT GATCAAGGCA AGATATCAAG GAAACACCTA GAATTTGCTC TCCAGAGTGC AAGAGATGCT 000640 000641 TGTTTACAAG AAAAAATAAA TTTTGACATG TCTAACCTAA AAAGTAACAA TGAAATTCTT TCTCAACAAC TTTCTGAAGC 000720 000721 TCAAAGTAAA TTCAGTAACC TAACAATTTA GTTCCATAAC ACAAGAGATG CTCTCAGAGA TATAACTTTG GTTTCAGAAC 000800 000801 GTCTACAAAG AGATCTACGC CAAACACGAT GTCAGATGAA GGACACTGAA CAAATGTATG AAAATGAGCA AGATAAAGTG 000880 000881 AGTAAATGCA CTGCAAAGCA GGAAGCCATG GAAGAGAGAT TATCCCAGCT ACAAAATGAA AATATGCTGC TTCAACAGCA 000960 000961 ACTAGATGAG GATCACAAGA TGCAGATACG GAAGAAAAGA TAATTAATAC TCAAGACCAA TTTCTTGGGA ATGAAAAGCA 001040 001041 ACGTTGTTCA CTAGAAGATA AATATAAGGA GTTATTAAAT GAGTGTGATC ATTTAAAAGA AATACTATAT CAATATGAAG 001120 001121 AAGAGAAAGC AGAAAGAGAA CTAAGTAAGA AACTCTTACA AATGACAGAA AAGAAGCTCA ATGAATGTGA AAATGGCAAG 001200 001201 TTTAGTTTTT ATGGAGATGT AAAGACCAAT CAATTTGATG TAGATATTCA GATTAATAAT CTAAAATATA TCTAAATCTG 001280 001281 GATACAGAGA ATAAATTTTT TCAACAGGAG TTATTATCTA TGAAAACAAT ACAAAAAATG TGAAAAACTA CAGAAGAAAA 001360 001361 AACCATGTTT GAACAAGAAG TAATAGACCT CAAAAGTCAT GTAGACATAA GTATGGTAGA ATGTGGTCAA GTCAAACAAT 001440 001441 ATAAACAGGA GATTGGAGAA AGAGCAAGAC AGCGTATAGA AGAATTACAA GAAGTCAATT TTTAAAAATG TAGCTGTTTA 001520 001521 ATTTGCTTTA GACAGAAGCA GCATCTAAAG AACATTTAGA GCAGTTAAGA TGGCATGATA TTACTTCAAT AAATAAGATG 001600 001601 GAACTCAAAA TTAAAGCTCT GGAAGCTGAG CAGTCCCAAA TGTAAATTGC TCAAGAAAAC TTTAGTGATA GCGAATTAGA 001680 001681 AAAACAGAAG CAGCTATATC TAGAAGAATT |
Predicted Small Protein
Name | NONHSAT033286_smProtein_1364:1504 |
Length | 47 |
Molecular weight | 5511.1846 |
Aromaticity | 0.0652173913043 |
Instability index | 64.5369565217 |
Isoelectric point | 4.75030517578 |
Runs | 8 |
Runs residual | 0.0125517598344 |
Runs probability | 0.0359697933228 |
Amino acid sequence | MFEQEVIDLKSHVDISMVECGQVKQYKQEIGERARQRIEELQEVNF |
Secondary structure | LLLEEEEELLLLLLEEEEELLLEEHHHHHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |