NONHSAT032506
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT032506 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
605 nt |
Genomic location |
chr13+:24846827..24852907 |
Exon number |
2 |
Exons |
24846827..24847275,24852752..24852907 |
Genome context |
|
Sequence |
000001 GAGACAGGCT CATAGCAGGA TCgctttgct ggcagacaca cctggctttg aatccagccc cgcaacttgg ggaaagttac 000080
000081 ttaacatctt tgagccacgg tttcctcctt cataaccaga cagcaacact ccaagatgct tgtgaggctc tcaagaggat 000160 000161 ttattccagc gctgagcgca gtgcctggcg cacattaagA TGCCAGGAAG CCGGATGGGT GATTGCTCAG GTCTGTCCAG 000240 000241 CCAGTTGGGC AGCCGTCAGA AACTGGGAGG GCTGACGAGA CACCAGCCCA GAGAGCTGTC AGGGAGCGGC AGAGCAGAGG 000320 000321 AGAGGGCCCA GGATGGATCG GCAGGTGTCA GCCAGGATGG ACGGGAGGAG CCGTGCTCAG AGCCAGCAGC CCCAGGACGA 000400 000401 GCAGCTCCTG GCTAGGAACA GAAGACAGGC ACTGTGGGAC AAGTCAAAGg gtgctttcat gtatcatcat tccacttgag 000480 000481 gctcaaagca caccaataac aagtacttgt tcagaatgta taaacaaccc tgagagatgg gttttatcat ccacattcaa 000560 000561 caggtgaaaa aacaaagaaa gaaacttgac caaggactca tacTC |
Predicted Small Protein
Name | NONHSAT032506_smProtein_332:478 |
Length | 49 |
Molecular weight | 5674.2554 |
Aromaticity | 0.0625 |
Instability index | 82.70625 |
Isoelectric point | 10.7971801758 |
Runs | 7 |
Runs residual | 0.0197368421053 |
Runs probability | 0.032881621117 |
Amino acid sequence | MDRQVSARMDGRSRAQSQQPQDEQLLARNRRQALWDKSKGAFMYHHST |
Secondary structure | LLLLEEEELLLLLLLLLLLLHHHHHHHHHHHHHHHHHLLLLEEEEELL |
PRMN | - |
PiMo | - |