NONHSAT032340
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT032340 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1199 nt |
Genomic location |
chr13-:21495803..21497372 |
Exon number |
2 |
Exons |
21495803..21496667,21497039..21497372 |
Genome context |
|
Sequence |
000001 GAAGCCATCA GGTCAGGTGG GGAGTTTTTC CAGCTTCTGT TCTGGGGGTC TTGTGTGGAT GCCCAGGGAC AAGCCAGGCA 000080
000081 AGGAGGCTGC TTTTGCCCTC GCCCTGTGGC TGCCAGACTG ACTGATCCCG TTGGCATCAG ATTCACACTG AAGAAACTGT 000160 000161 GCTTTGTCCT GTGAATAGAA AGCCATGTCC AGAAGGCTCT AGTGTGTATA ACCCACTTTC CCAGGAAGCA CTGCAAAAGA 000240 000241 TAAAGGATGT CAGGGACAGA AGAAGAAAAA GTAGAAAGTA TCAGAAAATC TCTAAGAGTT GCCTAGTAGA CACGTCATAC 000320 000321 AAAAAGCCTA GTCTTGTTGC AGGTCTGTCT CAGTGCCTAG CTGACCCAGT GGTTTTAAAA GGACCAGAGT ATTTTGGGAA 000400 000401 ATTGGATGAA ATAAGTAGAG TTGCCATCAA TAGTAGCACA CTATGTTCAG GCTAGCTGTT GTCCCCGTGC CCATACTCAC 000480 000481 ATCATCTCTA GCTCTCAGGG CCACACTGTG TGAAGACAAC GTGTGGAGAT GGTGGAGCAC TCAGGCATTT CTAGGCTCAA 000560 000561 CAGAACCCTG CAGCTGAAGA TTAAACACCA CCTGCATCTA CTCAACTCAC AGGTCAGAAT GGCCGCTTCA CAAAAGAAAA 000640 000641 ATCGCTCGCA GCTGAACACC AAGAATATGA ACAGCAGCTA CTTCAAGAAT TCTATACATT AAATCCCAAT TATCTCCATC 000720 000721 TCTCCATGGG TTTAGATGAT AGGAATAAGA TCCAAATGAT ACCACTGCAG AGCCCAACTG ACAAATGGCT TTGATTCTCC 000800 000801 CAGAGTAGGG AGGAATGACA ATTTCCACAG ACATCTAACA GGGACAGACC TTCACCACCC ACTGGTTTGC CCAAATCCAG 000880 000881 CCCAGTCATT CCTGTCCGTT CATCTGGTCA CAGTGAACAA TTGCCTTCGG AAGGGGCAGG GGCAGAGTCA CAGCTACTAT 000960 000961 TCTTGGACAA CCCAGCCCTG TCCTGGATCC CCATGTCATC CAAGGACTGC CCCATACCAC CAGACCCAAG CACCTCCTCC 001040 001041 ATCAGTCACT TGGCACTGTC ATTCTCAAGC CATTGGACTT TGGTTTTTCT CAACAGCCAG AGGATGTGCT GGGCTTTGAT 001120 001121 GTCTTCGATG CTGTTTGGAA AGCCTTAGCA GGCCTGACTG AGATGGAGCT GCCAGGCCAG GCGTGAGCCT TCCCATCCA |
Predicted Small Protein
Name | NONHSAT032340_smProtein_992:1147 |
Length | 52 |
Molecular weight | 5658.5521 |
Aromaticity | 0.0980392156863 |
Instability index | 50.2450980392 |
Isoelectric point | 7.85699462891 |
Runs | 7 |
Runs residual | 0.0169869928169 |
Runs probability | 0.0554672319378 |
Amino acid sequence | MSSKDCPIPPDPSTSSISHLALSFSSHWTLVFLNSQRMCWALMSSMLFGKP |
Secondary structure | LLLLLLLLLLLLLLLLHHHHHHHLLLLEEEEELLLHHHHHHHHHHHHLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL |
PiMo | oooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiii |