NONHSAT031927

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT031927

Source

NONCODE4.0

Same with

,

Classification

intronic(AS)

Length

2223 nt

Genomic location

chr12+:129594174..129597839

Exon number

2

Exons

129594174..129596214,129597610..129597839

Genome context

Sequence
000001 ATTTTTCTCT TGCTGCCACC ACGTAAGAAG TGCCTTTCGC CTCCCGCCAT GATTCTGAGG CCTCCCTAGC CATGGGGACC 000080
000081 TGTAAGTCCA ATGAAACCTC TTTTTGTTCC CCGTTTTGGG TATGTCTTTA TCAGCAGCGT GAAAACGGAC TAATACACCC 000160
000161 TCTCCCTACC AGCGGGTGTA GTCTGATGAG GTCTATGCGG CAGCGTTGGG TGGCAGCCAT GGAGGAATGC TGTTGAAATG 000240
000241 TCCCTTCTGT CCTCAGGGGC CTTCAGAAGC CACCTGGTCA GTGTCCGAGC ATGGCCAAGG TGCAGGGTGG CTGCTGGGAC 000320
000321 TCCATGCAAG GCTCCTCTAT GGGCAACCTC TGCGGCAGCA TTTCCTGCTT GGCTGCCCAA GGATTCCCAG TGCTTCCTGC 000400
000401 AGTCAGGCAC TTCCTGCCCG GTTCTCCCTC CTTCCCATCC TCCTTTCCCA GGGACCAGAC CTGCATCGCA TCCTGAAGCT 000480
000481 CAGCCTGCCT ACTCCTTCTC CATCTTTTCT TTATCCTTCA CAACTGCAGT CCTCAATTAA TCTCTGGTGC ACTTAACTCT 000560
000561 GTCTGCTTCC TGAAGATGCT CATAGATTCT GAGGATTCCC CATGTGCTGT GATGTGAGAG TTAGGGGCGA GGGAGGAAAA 000640
000641 CAGCCAGCTC CACTACCTGT CTACCCTCCC TCCCGACCAT TGAGAAAGTT CCCTGTTAGA GATTCATTCC TTTGGACCAT 000720
000721 GAAGCCTTTT GATTCCTATT AACCTTGAGT GAGTCACGCT TAAGCCTTTT AAAAAATTTT CTGAGTTTTT GTTTGTGAAA 000800
000801 TATAACATAT ATACCAATGA ACATGAGATA TATAAATGCG TTGTATGAAT AATTAGAAAG CAAACTATAT TCCAGCAAGC 000880
000881 GAAAACATAA CACACTGCCC CAGAAGCACC CACAATCCAC GAGTAAGCAC CTCCCTCCCC CTGAGGTGCA TAAGTAAGGA 000960
000961 GAGGAGGGGC AGAGGAGCTG CCAGGGGAAG GACCAAGGAT GTGCTCTATA GGTCAGCCCC CTGGCTCTGC CTCTCCTTGT 001040
001041 TGGCAGAGAT CAGCCTGAGG GCCGCGCCGC ACACCACAGG CCCATGACCC TCCATCGGAG TCACCGGGCG CTGGCTGAAC 001120
001121 AAGCACCTTC AGTGAGCTCT GGATTACAAC ACAGCTATGA AAAGAAGCCA GCCGGTGCTC TCCCTACCCA TATGGAGAGA 001200
001201 TTGCCAGGCA GATTCCAAAG TGGAAAAGTC AGAGGCAATA CAGGAGGGCC TGTGTGCCCA GCTCCCACTG TGAAAACCAA 001280
001281 CCCAGCTGAT GGGGATTCTT CTCTATTGCT TTGTAGGTCG TCGCTGCCCT CAGCCTCCAG ATGCAGCCCC CCTGCCACCT 001360
001361 TCAGGACCCC TGGCTCTCCC CTGGACTCAG TAGCGAAAGG GTTTATGTGC TCGGAGGGAG ACCTTCAGGA ATCTGTGCAT 001440
001441 AGAATGCCAT AGTGCAGAGG AAAGTAAGAC TATGCAGTTG TATTTGACTT AAAACCTCCG GAAAGATAAA TAGGGAAGCA 001520
001521 ACAAAACCTA CAGGGAACAG GGGAGGAAGA GGGATGGGGC TGCAAGCCAG GGGATGCCTG CAGCCACCAG GAGATGGGGG 001600
001601 GAGGCAGGGA GGATCCTTTC CCAGAGCCTC TGGAAGGAGT ATGGCCCTGC CTACACCTTG ATTTGGATTT CTGGCCTCTG 001680
001681 AAACTGTGAG AGAACAACTG TCTGCTGTGG AAAGTAACCT AGGTTTGTGG GAATTCGTTA CAGCAGCCCC AGAAAATGGA 001760
001761 ACAGCTGCTA AGTGAGACTC CTCAGCCAGG CCAGAGAATG TGCATTCTGA CGGACTGCTT CTCATTTGCA CTGATCACTG 001840
001841 TGAGTGTCTG ATGGGTGGGC ATCCGGCGCC CAGAGAAGGA GTTGCTCTAT TATCCTGGCA CTCCATAAAG AACAGGTAGA 001920
001921 AATAAGCGCT TCTTACCAAG ATGAAATCCA CCCATCATTT CTGAATGGCT CAGTTTTGAT TTCATCTCCC AAGGTCTTCT 002000
002001 TTCTGAAACC AGCCCAACTT TTCTCCCAGA GAGTATCATG GAACTGAACT TTCAAGATCA TGGCATCTGG ACATCGAGAA 002080
002081 AACGGAACCC TCATCTGGCC ACCTGCTGCT TTTTGACCAA TTCCCATATA AACCGCTAAC TTCAGTCAGT TGGAGGGATG 002160
002161 GATTTGAGAT TTGCCTTCTG TCTCTCAGGT GATGTCACCA GCAATAAAGC CTTCTTCCCT GGC
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Predicted Small Protein

Name NONHSAT031927_smProtein_290:475
Length 62
Molecular weight 6319.2125
Aromaticity 0.0819672131148
Instability index 67.5590163934
Isoelectric point 7.68682861328
Runs 7
Runs residual 0.0380629357452
Runs probability 0.0407676584147
Amino acid sequence MAKVQGGCWDSMQGSSMGNLCGSISCLAAQGFPVLPAVRHFLPGSPSFPSSFPRDQTCIA
S
Secondary structure LLLLLLLLLLLLLLLLLLLHHHHHHHHHLLLLLLLLHHHHLLLLLLLLLLLLLLLLEEEE
L
PRMN -
PiMo -