NONHSAT031479
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT031479 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
492 nt |
Genomic location |
chr12+:122439610..122441833 |
Exon number |
2 |
Exons |
122439610..122439825,122441558..122441833 |
Genome context |
|
Sequence |
000001 CTGCACATAA CAAAGCATGT CTGTTGGGAA TCCCACATGA ATAAGTTATG AAAAGAACAG TGAGTGGTGG CTTTTGTTCC 000080
000081 CGCGCTCTGT CCGTCCTTTT GTTTCTTCTG GGCTTATTTT CCCTTTGTTC CACTGACCTG TCATCTTGCC GGCTTGGGTG 000160 000161 GGTGAATATT GGCCACCCGT AGAGGATCCA GTTTGACAGC TGTTTCAGGA GAATAGGTTC AGAAATTTGC CTTGAAGAAG 000240 000241 AACTTCCAGA CGAAATCACT GCAGAAATAT TCGCGACTGA AATTCTTGGC TTAACCATTT CAGAAGATTC CGGCCAGGAT 000320 000321 GGTCAGTGAA GTTACCAGGA ATGTTTAAAG CACAAAGGAC TTTGGGTGTG TGTGCATGCA CATGTGTGTG TTTTCCATGA 000400 000401 GGCACTGCTT TTTATGCATT TCCCTCCCCC CTCTCATCTT TAGAACATTT AGACATTAAA GCAAGTTTCT GGTGAGCAAT 000480 000481 GGAATTCACA AA |
Predicted Small Protein
Name | NONHSAT031479_smProtein_47:181 |
Length | 45 |
Molecular weight | 4743.5975 |
Aromaticity | 0.0909090909091 |
Instability index | 46.3568181818 |
Isoelectric point | 9.21343994141 |
Runs | 7 |
Runs residual | 0.00401069518717 |
Runs probability | 0.0207181971888 |
Amino acid sequence | MKRTVSGGFCSRALSVLLFLLGLFSLCSTDLSSCRLGWVNIGHP |
Secondary structure | LLEEELLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLEEELLLL |
PRMN | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooooo |